Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0857 ATGATGTGCGAAGAAGCAACCCGTAAGAAACAGCAATACCAAGTGTTGGAGGAAATCGGTCGTGGCAGGTTCGGCACCGTTTTCCGCTGCTTCCACACCGTTACCAACAATTTCTACGCTTCCAAAGTGATCGATAAACGCCTCCTAACCGATTCCACAGATCGCCAATGCCTCCAAATCGAATCAAAAGTGATGACCTTTCTCTCACCGCACCCCAACATTCTCCAAATCTTCGACTCCTTCGAAGACACCCATTTTTCATCCATCGTCGTCGAGCTCTGCCAACCCCTCACCCTCTTCGACCGCATCTCCGACGGCTCCTTGCCCGAACCCCACGCCGCTTCCCTCATGAAGCAGCTTCTAGAAGCCGTGGCGCATTGCCACGCGCTCGGAATTGCGCATAGAGACATAAAGCCCGACAACCTGCTGTTCGACTCGGGGAACAACCTTAAACTCTCCGACTTTGGATCCGCCGAGTGGTTGGGTGAGGGGAGGAACATGAACGGTGTGGTGGGTACGCCGTATTACGTGGCACCGGAGGTTCTGATGGGAAGAGATTACGACGAGAAAGTGGACGTTTGGAGTAGCGGGGTGATTCTCTACACAATGTTGAGTGGTATTCCACCCTTTTATGGAGACTCTGCTGTTGAGATTTTTGAGGCTGTTGTTAGGGCCAATCTTAGGTTTCCCACAAGAATTTTCAAGTCTGTGTCTGCTCCTGCTAAAGATCTTCTCAGGAAGATGATTTGTAGGGATCCCTCTAGGCGAGTTTCAGCAGAGCAAGCCTTGAGACACCCTTGGATATTGAGTGGGGGTGTGACGAGTGGTGATCTATCTTGA 840 0.5131 MMCEEATRKKQQYQVLEEIGRGRFGTVFRCFHTVTNNFYASKVIDKRLLTDSTDRQCLQIESKVMTFLSPHPNILQIFDSFEDTHFSSIVVELCQPLTLFDRISDGSLPEPHAASLMKQLLEAVAHCHALGIAHRDIKPDNLLFDSGNNLKLSDFGSAEWLGEGRNMNGVVGTPYYVAPEVLMGRDYDEKVDVWSSGVILYTMLSGIPPFYGDSAVEIFEAVVRANLRFPTRIFKSVSAPAKDLLRKMICRDPSRRVSAEQALRHPWILSGGVTSGDLS* 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0857 279 Gene3D Phosphorylase Kinase; domain 1 2 95 - -
Apr4g0857 279 ProSitePatterns Serine/Threonine protein kinases active-site signature. 132 144 IPR008271 GO:0004672|GO:0006468
Apr4g0857 279 PANTHER SERINE/THREONINE-PROTEIN KINASE 10 274 - -
Apr4g0857 279 Pfam Protein kinase domain 13 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr4g0857 279 CDD STKc_CAMK 12 267 - -
Apr4g0857 279 PIRSF ILK 3 264 - -
Apr4g0857 279 PANTHER PHOSPHOENOLPYRUVATE CARBOXYLASE KINASE 2 10 274 - -
Apr4g0857 279 SMART serkin_6 13 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr4g0857 279 Gene3D Transferase(Phosphotransferase) domain 1 98 275 - -
Apr4g0857 279 ProSiteProfiles Protein kinase domain profile. 13 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr4g0857 279 SUPERFAMILY Protein kinase-like (PK-like) 9 270 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0857 Apr-Chr4 6923139 6924078 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g0857 13 271 EF-hand Containing Proteins AT4G04720 42.205 1.46e-72 230
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Apr4g0857 Pkinase 5.1e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0857 - K08794 gmx:547573 426.402
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0857 4 6923139 6924078 Apr8g1560 8 25399263 25400379 ECH
Apr4g0857 4 6923139 6924078 Apr4g0857 4 6923139 6924078 ECH