Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0851 ATGAGGATTATGATAAAAGGTGGTGTTTGGAAGAACACCGAGGATGAAATTCTGAAAGCGGCTGTTATGAAATATGGGAAAAACCAGTGGGCTCGAATCTCTTCCCTTCTCGTCCGCAAATCTGCTAAGCAGTGTAAGGCTCGTTGGTATGAATGGCTCGATCCTTCCATTAAGAAGACCGAGTGGACAAGAGAAGAGGATGAGAAACTGCTTCATCTTGCCAAGCTTATGCCGACACAGTGGAGAACAATTGCGCCAATTGTTGGCCGTACTCCTTCACAATGCCTTGAGCGGTATGAGAAGCTCCTTGATGCAGCATGTGTAAAGGATGAGAACTATGAACCTGGTGATGACCCACGGAAACTGCGTCCTGGTGAAATTGATCCAAATCCTGAGTCAAAGCCTGCACGCCCTGATCCTGTTGATATGGATGAGGATGAGAAGGAGATGCTTTCTGAAGCACGGGCTCGGTTAGCCAACACTAAAGGCAAGAAGGCAAAAAGGAAAGCCAGGGAGAAACAGCTTGAGGAAGCCAGGAGGCTTGCTTCTTTACAAAAAAAGAGAGAACTGAAGGCTGCTGGAATTGATATCAGGCAGCGAAGGAAGAAAAGGAAAGGAATAGACTATAATGCAGAAATTCCGTTTGAGAAGAGGCCTCCTCCAGGGTTTTTTGATGTTACTGATGAGGAAAGACCAGTGGAACAGCCCAAGTTTCCTACTACAATTGAAGAACTTGAGGGAAAAAGAAGGGTTGATGTTGAAGCACAATTAAGAAAGCAAGACATTGCAAAGAATAAAATTGCACAAAGACAAGATGCCCCATCTGCTATTTTGCATGCCAACAAGCTGAATGACCCAGAAACGGTTAGAAAGAGATCAAAACTGATGCTTCCACCACCTCAGATTTCTGACCAAGAATTGGATGAAATTGCAAAGTTGGGTTATGCCAGTGACCTTGCAGGCACTGAGGAATTTGCAGAAGGTAGGAGTGCTACACGTGCTCTTTTGGCTAATTATGCTCAGACACCCAGCCAAGGAATGACTCCTTTAAGAACTCCTCAGAGAACACCAGCGGGTAAAGGAGATTCCATCATGATGGAAGCTGAAAATCTGGCTAGGTTGAGGGAGTCTCAGACACCATTGTTAGGAGGAGAAAACCCAGAGCTGCATCCTTCAGATTTTTCCGGGGTCACTCCCAAGAAAAAGGAAATTCAGACTCCTAACCCAATGCTGACCCCCTCTGCAACTCCCGGAGGTGCAGGCCTTACTCCCAGAAGTGGTTTGACACCAGCAAGGGATGGTTTTTCTTTTGGCACGACTCCAAAGGGAACTCCTCTCAGGGATGAGCTACATATTAACGAGGACATGGATATGCATGACAATGCTAAACTTGAGCTACGGAGACAAGCTGATATGAGAAGAAGTTTGCGCTCTGGTTTAAGCAGTCTTCCACAGCCCAGAAATGAGTACCAGATAGTTATGCAACCAGTTCCAGAAGATGCAGAAGAACCTGAGGAGAAAATTGAAGAGGATATGTCTGATAGAATAGCTAGAGAAAAGGCAGAAGAAGAGGCTCGACAGCAAGCATTACTTAGAAAAAGATCAAAAGTTCTTCAAAGGGAACTTCCTAGGCCTCCTGCCGCATCTTTGGAGCTCATTAGAAACTCCTTGATCAAAGCTGATGGGGACAAGAGTTCATTTGTACCCCCGACCTCAATTGAGCAAGCTGATGAGATGATAAGAAAGGAGCTTCTAACCTTACTGGAGCATGACAATGCTAAGTATCCACTTGATGAGATAGTAAATAAGGAGAAAAAGAAAGGAGCCAAGCGTGCGGCAAATGGGCTTGCTATCCCTGTGATAGAAGATTTTCAGGAAGACGAGATAAAAGATGCTGAGCAGTTGATAAAGGAGGAAGCAGAGTATCTTCGTGTGGCAATGGGGCACGAAAATGAATCCCTCAGTGAATTTGTTGATGCACATACAACTTGCATTAATGATTTAATGTACTTTGCCACCCGTAATGCATATGGTCTATCAAGTGTTGCTGGAAACATGGAGAAGCTAGCAGCTTTGCAGGATGAATATGAGAATGTGAGAAGCAAGTTGGATGATGGTAAGGAGAAGATGGTACGCCTTGAGAAGAAGGTGACAGTACTCACCCAAGGCTATGAGATGAGGGCAAAGAAAAGTCTTTGGCCGCAAATTGAAGCCACTTTCAAGCAAATGGACATAGCTTCGACAGAGTTTGAGTGTTTTGAAGCTTTACAAAAGCAGGAGCAATTAGCTGCGTCACACAGGATAAATAATCTTTGGGCTGAAGTACAGAAGCAAAAGGAACTTGAGAAAATTTTACAAAAGAAGTACGGGGATCTTGTGGCAGAACTGGAAAGGATACAAAATGTCATGGACCAGTTCAGGGCAAAAGAAGCACAACAGCAAGAAGAAATTGAAGCAAACAATTGTGCCCCTGAATTTATTGAGGCCAAGACTAATGAAATTAATGTGCAGGGTACAGAGAATTGTGAAGCTGTACCCCTCTCAGTAGACCATGGAAGTACTATATCAGTTAGTTCATCTAATGATGGAACTGCTGACCCGCAAGCGGACATGCAAGACCAGACCACTTCTATCTCCAAAAACGATATGGATGTGGATTCTTGTAAAGAGCAAATGATGGACAACACTGATGATAAGTTGCCAGATGCACCTTCTGCAGAGGATAACAATGAAGAAGTGGTAGAAGGTAAAAGCACTGATGGTTATATTGACAGCAGAGACACTACACTAGATAGGAGTGCTGCAGTGGAAACAAGTAGTATTGAGGAAAATAGGGAGGATCGAGATGTTGAGAATCCAAATGAGGTGAACGCCGTAGACCAACATGGTAAATAA 2895 0.4411 MRIMIKGGVWKNTEDEILKAAVMKYGKNQWARISSLLVRKSAKQCKARWYEWLDPSIKKTEWTREEDEKLLHLAKLMPTQWRTIAPIVGRTPSQCLERYEKLLDAACVKDENYEPGDDPRKLRPGEIDPNPESKPARPDPVDMDEDEKEMLSEARARLANTKGKKAKRKAREKQLEEARRLASLQKKRELKAAGIDIRQRRKKRKGIDYNAEIPFEKRPPPGFFDVTDEERPVEQPKFPTTIEELEGKRRVDVEAQLRKQDIAKNKIAQRQDAPSAILHANKLNDPETVRKRSKLMLPPPQISDQELDEIAKLGYASDLAGTEEFAEGRSATRALLANYAQTPSQGMTPLRTPQRTPAGKGDSIMMEAENLARLRESQTPLLGGENPELHPSDFSGVTPKKKEIQTPNPMLTPSATPGGAGLTPRSGLTPARDGFSFGTTPKGTPLRDELHINEDMDMHDNAKLELRRQADMRRSLRSGLSSLPQPRNEYQIVMQPVPEDAEEPEEKIEEDMSDRIAREKAEEEARQQALLRKRSKVLQRELPRPPAASLELIRNSLIKADGDKSSFVPPTSIEQADEMIRKELLTLLEHDNAKYPLDEIVNKEKKKGAKRAANGLAIPVIEDFQEDEIKDAEQLIKEEAEYLRVAMGHENESLSEFVDAHTTCINDLMYFATRNAYGLSSVAGNMEKLAALQDEYENVRSKLDDGKEKMVRLEKKVTVLTQGYEMRAKKSLWPQIEATFKQMDIASTEFECFEALQKQEQLAASHRINNLWAEVQKQKELEKILQKKYGDLVAELERIQNVMDQFRAKEAQQQEEIEANNCAPEFIEAKTNEINVQGTENCEAVPLSVDHGSTISVSSSNDGTADPQADMQDQTTSISKNDMDVDSCKEQMMDNTDDKLPDAPSAEDNNEEVVEGKSTDGYIDSRDTTLDRSAAVETSSIEENREDRDVENPNEVNAVDQHGK* 965
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0851 964 MobiDBLite consensus disorder prediction 399 413 - -
Apr4g0851 964 Coils Coil 796 816 - -
Apr4g0851 964 MobiDBLite consensus disorder prediction 938 964 - -
Apr4g0851 964 Coils Coil 682 716 - -
Apr4g0851 964 MobiDBLite consensus disorder prediction 265 285 - -
Apr4g0851 964 Coils Coil 167 187 - -
Apr4g0851 964 MobiDBLite consensus disorder prediction 853 964 - -
Apr4g0851 964 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 2 57 IPR017930 -
Apr4g0851 964 SMART sant 6 55 IPR001005 -
Apr4g0851 964 SMART sant 58 105 IPR001005 -
Apr4g0851 964 MobiDBLite consensus disorder prediction 113 150 - -
Apr4g0851 964 PANTHER - 1 898 - -
Apr4g0851 964 ProSiteProfiles Myb-like domain profile. 54 103 IPR001005 -
Apr4g0851 964 Gene3D - 60 114 - -
Apr4g0851 964 MobiDBLite consensus disorder prediction 213 237 - -
Apr4g0851 964 MobiDBLite consensus disorder prediction 375 455 - -
Apr4g0851 964 CDD SANT 10 53 IPR001005 -
Apr4g0851 964 CDD SANT_CDC5_II 55 106 - -
Apr4g0851 964 Pfam pre-mRNA splicing factor component 406 654 IPR021786 -
Apr4g0851 964 MobiDBLite consensus disorder prediction 853 882 - -
Apr4g0851 964 MobiDBLite consensus disorder prediction 340 362 - -
Apr4g0851 964 MobiDBLite consensus disorder prediction 883 931 - -
Apr4g0851 964 ProSiteProfiles Myb-like domain profile. 2 53 IPR001005 -
Apr4g0851 964 SUPERFAMILY Homeodomain-like 33 106 IPR009057 -
Apr4g0851 964 Pfam Myb-like DNA-binding domain 10 70 - -
Apr4g0851 964 Gene3D - 5 59 - -
Apr4g0851 964 MobiDBLite consensus disorder prediction 222 237 - -
Apr4g0851 964 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 58 107 IPR017930 -
Apr4g0851 964 PANTHER CELL DIVISION CYCLE 5-LIKE PROTEIN 1 898 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0851 Apr-Chr4 6846079 6851884 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g0851 1 818 MYB-Related Transcription Factor Family AT1G09770 76.736 0.0 1238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Apr4g0851 Myb_Cef 3.1e-62 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0851 K12860 - gmx:100790369 1513.82