Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0845 ATGACATCATCTTCTCGTCTTCTTCCAACTCCCCTGGAAAACAAGTATATGAAACCCCCAGATTCTTTTCAGCTTTCACCTTTGGATGATCTGACTACTAATCCTTCCTCACTTTCAGCGACATCAACAAATCTGATCAAAAGTGCTGGGAAGATGTTTTCGTCACCTACTGAATGTTCTGATGACATGCCATTTTCTTCAGTTTCACAGCATGATAGGCAATATCAAGATTCCCACTTTGTTACTCAGACGTTATGTGACAATGAATCTTCTAAAATGCATCCAACAACATTCATTTCTCACCCACAAGGGAGTGAAGATATTTCCTGGGGACCAGATCCATTTCAGGATATTATTAGTTTTCCTGAAAATGTTTCTGTCCAGCATGATCAGGAGGAAAACAGTGCTTGTTACGTGAATGATGTCAGTGTTAGAAAATCTGATTTTGGGGAGTGGGTTGATCAGTTAATGTCAATTGATGATTCTCTTCAGCCAAATTGGAGTCAGCTTCTTGGTGATGACAATGTAGCAGAACCAAAACCAAAGGCAACTCAGGTTTCCCAGCAGTTCTTTATACCATCTGGAGAAGTTAATGTTCTATGTAATACGGCATCAACTGCACCGCAGACTAAGCCTAGAATGCGTTGGACTCCGGAACTTCACGAAGCCTTCGTGGAAGCAGTCAATCAGCTTGGTGGTGGTGAAAAGGCTACTCCAAAGGGTGTCTTGAATATAATGAAAGTCGAGGGCCTTACTATCTATCATGTAAAAAGCCACCTCCAGAAGTATAGAACTGCCAGATACAAGCCAGAGACTTCAGAAGGAACTTCCGACAAACAGACTCCAATAGAAGAAATGAAATCTCTAGACTTGAAAACGAGTAAAGGGATCACTGAAGCATTACGGTTACAGATGGAACTCCAGAAGCGACTTCACGAACAACTTGAGATCCAAAGAAAGTTGCAGATTCAAATTGAAGACCAAGGGAAACGTCTTCAGATGATGTTTGAGAAACAGAGAGAGATGGGTGACAGCAAGGTTAAGGGCACCTCTTCCCTTATTGATGAGCCTTCTGCTGCGCCATTAGACACCGCACTTCCTTCTCCGCCAGTGGAAACCTCAAATGAAGAGCATGACGAACTTGGAAGCAACCATAGCATCCCGAAAACCATGTCAGAAGAAAGTTCCCAGGATGCAAGTCCAAAACAAATGGCATTGGCAAGTGAAGCTGAAGTTGTTAATGAAGCCGATGTGGTGGAGGCAGAGGCGGCCGACAATCAGTTTGCTCCACCCCCCACAAAACGGGTGAAGAGTTCATGA 1320 0.4341 MTSSSRLLPTPLENKYMKPPDSFQLSPLDDLTTNPSSLSATSTNLIKSAGKMFSSPTECSDDMPFSSVSQHDRQYQDSHFVTQTLCDNESSKMHPTTFISHPQGSEDISWGPDPFQDIISFPENVSVQHDQEENSACYVNDVSVRKSDFGEWVDQLMSIDDSLQPNWSQLLGDDNVAEPKPKATQVSQQFFIPSGEVNVLCNTASTAPQTKPRMRWTPELHEAFVEAVNQLGGGEKATPKGVLNIMKVEGLTIYHVKSHLQKYRTARYKPETSEGTSDKQTPIEEMKSLDLKTSKGITEALRLQMELQKRLHEQLEIQRKLQIQIEDQGKRLQMMFEKQREMGDSKVKGTSSLIDEPSAAPLDTALPSPPVETSNEEHDELGSNHSIPKTMSEESSQDASPKQMALASEAEVVNEADVVEAEAADNQFAPPPTKRVKSS* 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0845 439 MobiDBLite consensus disorder prediction 1 40 - -
Apr4g0845 439 MobiDBLite consensus disorder prediction 385 403 - -
Apr4g0845 439 Pfam Myb-like DNA-binding domain 213 264 IPR001005 -
Apr4g0845 439 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 211 265 IPR006447 GO:0003677
Apr4g0845 439 MobiDBLite consensus disorder prediction 339 439 - -
Apr4g0845 439 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 2 439 IPR044848 GO:0003700
Apr4g0845 439 MobiDBLite consensus disorder prediction 265 285 - -
Apr4g0845 439 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 2 439 - -
Apr4g0845 439 Coils Coil 298 318 - -
Apr4g0845 439 Pfam MYB-CC type transfactor, LHEQLE motif 297 341 IPR025756 -
Apr4g0845 439 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 209 268 IPR017930 -
Apr4g0845 439 Gene3D - 210 269 - -
Apr4g0845 439 MobiDBLite consensus disorder prediction 26 40 - -
Apr4g0845 439 SUPERFAMILY Homeodomain-like 209 265 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0845 Apr-Chr4 6808970 6813694 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g0845 94 369 G2-like Transcription Factor Family AT3G04450 48.639 1.25e-76 242
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Apr4g0845 Myb_DNA-binding 9.9e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0845 - - gmx:100803267 586.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0845 4 6808970 6813694 Apr4g0845 4 6808970 6813694 ECH
Apr4g0845 4 6808970 6813694 Apr8g0360 8 3043705 3050937 PCT