Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0837 ATGGGGACTCCAGTGAATATTATTGTGGGTTCTCATGTCTGGGTTGAAGATCCAGATGTATCTTGGATTGATGGACAGGTGTGCCAAATCAATGGAAAGGATGCTCAAATTGAAACAACCAATGGAAAGAAGGTGGTCGCTAAGTTATCAAAAATATATCCCAAAGATATGGAAGCTCCTCCGGGTGGAGTGGATGATATGACAAAGCTTTCCTATTTGCATGAGCCTGGAGTCCTGCAGAACTTAAAAACTAGATATGAATTGAATGAAATATATACTTATACTGGAAATATTCTGATTGCAATAAATCCATTCCAAAGACTGCCTCATATTTATGATTCGCACATGATGCAACAATACAAGGGAGCACCATTTGGAGAGTTAAGCCCTCATGTATTTGCAGTAGCTGATGTTGCATATAGGGCAATGATTAATGAAAGAAAAAGCAATTCGATTCTGGTCAGTGGGGAAAGTGGAGCTGGTAAAACGGAAACTACAAAAATGCTTATGCGATACCTTGCTTTCTTAGGTGGTAGGGCTGCCACTGAAGGACGAACAGTTGAACAACAAGTGCTTGAATCAAATCCAGTTCTGGAAGCATTTGGCAATGCTAAAACTGTCAGGAATAACAATTCCAGTCGCTTTGGTAAATTTGTTGAGATCCAATTTGATAAGAGTGGAAGAATCTCAGGGGCAGCCATTCGAACATACCTTTTAGAGAGATCTCGGGTTTGCCAAATTAATGATCCTGAGCGCAACTACCACTGCTTTTATCTTCTTTGTGCTGCACCGCAGGAGGAAATTGAGAGATACAAATTAGGAAGTCCTAAAACGTTTCATTACCTTAACCAGTCAAAATGCTATGAACTGAATGATGTAAGTGATTCTCGTGAGTATCTTGCCACTAGGAGAGCTATGGACATTGTTGGAATAAGCCAAAAAGATCAGGAAGCAATTTTCAGAGTTGTTGCTGCAATTCTTCATCTTGGAAATATTGATTTTGCCAAAGGAAAAGAGGTTGATTCATCAATTCCAAAAGATGACAAATCCAAATTCCACTTAAAAACAACTGCTGAGCTCCTCATGTGTGATGCTAATGCCTTGGAAGATGCATTATGTAAGCGTGTCATGATCACCCCCGAGGAAGTTATAAAACGGAGCCTTGATCCCCAAAGTGCAGTAGTCAGTAGAGATGGCTTGGCAAAAACAATTTATTCTAGACTCTTTGACTGGTTGGTGGACAAGATTAATAATTCAATCGGACAAGACTCAAATTCTAAATCTTTGATTGGCGTCCTTGATATCTATGGTTTTGAAAGCTTTAAATCCAACAGTTTTGAGCAGTTTTGCATTAATTTCACAAATGAGAAGTTGCAGCAACATTTCAATCAGCACGTGTTTAAAATGGAACAAGAAGAGTATACAAAGGAACAGATTAATTGGAGCTACATTGAATTTGTTGACAACCAAGATGTTTTAGACCTTATTGAAAAGAAACCTGGAGGAATAATTTCACTCCTTGATGAAGCCTGCATGTTTCCAAAGTCAACACATGAAACATTTTCAAACAAGCTTTATCAAACATTTAAGAATCACAAGCGCTTCATTAAGCCAAAATTGTCTCGAACAGATTTTACTATTTCTCATTATGCTGGCGAGGTGCAGTACCAGTCTGACCAATTTTTAGACAAAAACAAGGATTATGTGGTCCCTGAACATCAAGATTTATTGAATGCTTCCAAATGTCCTTTTGTAGCAGGCCTTTTTCCTCCACTTCCAGAAGAGACATCAAAATCTTCAAAATTTTCTTCAATTGGTTCTCGTTTTAAGTTACAACTACAGCAACTAATGGAAACACTAAACTCTACAGAGCCTCATTACATTAGATGTGTCAAACCAAACAACCTTCTCAAGCCTGCAATTTTTGAGAATGTCAATATTATGCAACAACTTCGCTGTGGGGGTGTTTTAGAGGCAATCAGAATTAGTTGTGCTGGCTACCCTACGCGCCGTGCTTTCTTTGAGTTTGTAAACCGATTTTCCCTCCTTGCTCCAGAGGTCACAGAAGCGAACCATGACGAGAAGATCGTTTGCCAAAAGATTCTGGAAAGAGTGGGGCTTAAAGGATATCAGATTGGAAAAACAAAGATATTCCTAAGAGCAGGTCAGATGGCTGAACTAGATGCACGGAGAGCACAAGTACTCAGTCATGCAGCAAAAACTATCCAACAGCGTATACGAACCCATCAAGCTCGTAAACATTATCTTGCTTTGCGAATGAAGACTACGTACGTGCAGTCTCTGTGGAGAGGAAGACTTGCATGCAAACTTTATCAGAACATGAGAAGGGAGGCTGCTGTCGTGAAAATTCAGAAGAATATACGCAGATATGAAGCTAGGGGAGCATATACTAAACTCCAAGCATCAGTACTTACTTTGCAAACAGTTTTAAGGGCAATTGCTGCCCTTAAGGAGTTCAATTTCAGGAAACAGACTAAAGCTTCCATCATTATTCAGGCTCGGTGGCGGTGCCACAAAGCTGCTTCATATTATAGAAGGCTCAGAAGAGGTTCAATTATCACACAATGCCGATGGAGGGGGTGTGCAGCCAGGAAAGAACTTAGGAAACTGAAAATGGCTGCAAGAGAAACTGGTGCACTTAAAGAAGCAAAAGACAAGCTTGAAAAAAGAGTGGAAGAACTCACTTGGCGTCTTCAAATAGAAAAAAGTTTAAGGACCAACCTAGAAGAATCCAAATCACAAGAGATAGCAAAACTGCAGAATTCACTGCAGGAGATGCAGAACAAAGTTGATGAAACCAATGCTATGCTTGTAAAGGAGCGAGAGAATGCAAAGAAAGCTATTGAAGAAGCGCCTCCTGTTATTCAAGAAACTCAGGTTATTGTTGAAGACACTCAAAAAATTGAATCACTAACAGTGGAAGTTGAGAATCTAAAGACTTCCCTTGAGTCAGAGAAACAGAAAGCTGATGACTTTGAAAGGAAATATAATGAAGCCCAAGCTTGTAGTGAAGAAAGGAGTAAAAAATTAGAAGACACGGAGAAGAAGGTTCGTCAACTCCAAGAATCGTTGACCAGGCTAGAAGAGAAGATTACTAATTTAGAATCAGAGAATCAGGTTCTACGTCAACAAGCTGTGTCCATGGCACCGAATAAGTTTCTTTCCGGACGCTCCAGATCAATTATTCAGAGAGTGGACAGTGGACATATTGCAGTGGAAGCAAAGACAACTTTGGATATGCATAGCCCATCAATGAATCACAGGGAATCCTCTGAAGTGGAAGATAAACCCCAGAAGTCACTAAATGAGAAACAACAGGAGAACCAAGAGTTACTCATTAGATGTATTGCACAACACCTAGGCTTTGTTGGGAATAGACCAATTGCTGCCTGTATTACATATAAATGCCTCTTGCAATGGAGATCATTTGAAGTTGATCGTACTAGCGTTTTCGATCGTATAATCCAAACAATGGGCCATGCAATTGAGACCCAGGATAACAACGATGTGTTGGCGTATTGGTTATCCAATGCCTCTACACTTCTCTTGTTACTCCAGCGCACACTTAAGGCAAGTAGTGCTGCTGGAATGGCTCCTCTACGCCGTCGTTCTTCTTCAGGAACCCTATTTGGGAGGATGTCACATAGTTTCCGTGGTGCTCCAGCGGGAGTCAATCTTTCCCGAATTAATGGTAGCTTGAGTGGCGGAGTGGATACATTAAGACAAATTGATGCCAAATACCCAGCTCTGCTTTTCAAACAGCAGCTTACAGCTTATGTGGAAAAGATTTATGGAATGATTCGAGATAACTTGAAGAAAGAAATTTCTCCCTTGCTTGGATTATGCATCCAGGCACCCCGAACATCCAGAGCGAGCTTGGTTAAGGGATCATCACGTTCAGTTGCAAACTCGGAAGCGCAGAAAGCTTTAATTGCACACTGGCAGGGGATAGTTAAGAGCCTTGGGAACTTCTTAAAAACTTTGCAAGCAAACCATGTTCCCCCATTTTTGGTCCGTAAGGTGTTCAGTCAAATTTTTTCTTTCATTAATGTCCAACTTTTCAATAGTCTACTTTTAAGACGGGAATGCTGCTCATTTAGTAATGGGGAATATGTGAAAGCTGGTTTGGCTGAATTGGAGCATTGGTGTTTTATGGCCACGGATGAGTATGCAGGTTCTGCCTGGGATGAGCTCAAACATATTAGACAGGCTATTGGATTTTTGGTCGTACATCAAAAACCAAAGAAAACACTGGATGAAATAAGTCATGACCTGTGCCCAGTCCTCAGTATACAACAGCTATATCGGATCAGCACCATGTACTGGGATGACAAGTATGGCACACACAGCGTTTCTCCTGATGTCATATCCAATATGAGAGTGTTGATGACTGAAGATTCAAATAGTGCAGTCAGTAATTCTTTCCTGTTGGATGATGATTCAAGCATTCCTTTTTCTGCTGATGACATATCGAAATCAAAGGAACAAATAGATATCTCTGATATAGAGCCTCCACTACTAATTCGTGATAACTCTGGCTTTAGTTTCTTGTTGCCGTGCCCAGACTGA 4590 0.4052 MGTPVNIIVGSHVWVEDPDVSWIDGQVCQINGKDAQIETTNGKKVVAKLSKIYPKDMEAPPGGVDDMTKLSYLHEPGVLQNLKTRYELNEIYTYTGNILIAINPFQRLPHIYDSHMMQQYKGAPFGELSPHVFAVADVAYRAMINERKSNSILVSGESGAGKTETTKMLMRYLAFLGGRAATEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKSGRISGAAIRTYLLERSRVCQINDPERNYHCFYLLCAAPQEEIERYKLGSPKTFHYLNQSKCYELNDVSDSREYLATRRAMDIVGISQKDQEAIFRVVAAILHLGNIDFAKGKEVDSSIPKDDKSKFHLKTTAELLMCDANALEDALCKRVMITPEEVIKRSLDPQSAVVSRDGLAKTIYSRLFDWLVDKINNSIGQDSNSKSLIGVLDIYGFESFKSNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEQINWSYIEFVDNQDVLDLIEKKPGGIISLLDEACMFPKSTHETFSNKLYQTFKNHKRFIKPKLSRTDFTISHYAGEVQYQSDQFLDKNKDYVVPEHQDLLNASKCPFVAGLFPPLPEETSKSSKFSSIGSRFKLQLQQLMETLNSTEPHYIRCVKPNNLLKPAIFENVNIMQQLRCGGVLEAIRISCAGYPTRRAFFEFVNRFSLLAPEVTEANHDEKIVCQKILERVGLKGYQIGKTKIFLRAGQMAELDARRAQVLSHAAKTIQQRIRTHQARKHYLALRMKTTYVQSLWRGRLACKLYQNMRREAAVVKIQKNIRRYEARGAYTKLQASVLTLQTVLRAIAALKEFNFRKQTKASIIIQARWRCHKAASYYRRLRRGSIITQCRWRGCAARKELRKLKMAARETGALKEAKDKLEKRVEELTWRLQIEKSLRTNLEESKSQEIAKLQNSLQEMQNKVDETNAMLVKERENAKKAIEEAPPVIQETQVIVEDTQKIESLTVEVENLKTSLESEKQKADDFERKYNEAQACSEERSKKLEDTEKKVRQLQESLTRLEEKITNLESENQVLRQQAVSMAPNKFLSGRSRSIIQRVDSGHIAVEAKTTLDMHSPSMNHRESSEVEDKPQKSLNEKQQENQELLIRCIAQHLGFVGNRPIAACITYKCLLQWRSFEVDRTSVFDRIIQTMGHAIETQDNNDVLAYWLSNASTLLLLLQRTLKASSAAGMAPLRRRSSSGTLFGRMSHSFRGAPAGVNLSRINGSLSGGVDTLRQIDAKYPALLFKQQLTAYVEKIYGMIRDNLKKEISPLLGLCIQAPRTSRASLVKGSSRSVANSEAQKALIAHWQGIVKSLGNFLKTLQANHVPPFLVRKVFSQIFSFINVQLFNSLLLRRECCSFSNGEYVKAGLAELEHWCFMATDEYAGSAWDELKHIRQAIGFLVVHQKPKKTLDEISHDLCPVLSIQQLYRISTMYWDDKYGTHSVSPDVISNMRVLMTEDSNSAVSNSFLLDDDSSIPFSADDISKSKEQIDISDIEPPLLIRDNSGFSFLLPCPD* 1530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0837 1529 Pfam Myosin N-terminal SH3-like domain 9 51 IPR004009 GO:0003774|GO:0005524|GO:0016459
Apr4g0837 1529 MobiDBLite consensus disorder prediction 1092 1110 - -
Apr4g0837 1529 CDD MYSc_Myo11 76 720 IPR036018 -
Apr4g0837 1529 Gene3D - 439 623 - -
Apr4g0837 1529 ProSiteProfiles IQ motif profile. 831 858 IPR000048 GO:0005515
Apr4g0837 1529 MobiDBLite consensus disorder prediction 1084 1111 - -
Apr4g0837 1529 Gene3D Kinesin motor domain 65 662 IPR036961 -
Apr4g0837 1529 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 785 883 IPR027417 -
Apr4g0837 1529 SMART iq_5 853 875 IPR000048 GO:0005515
Apr4g0837 1529 SMART iq_5 830 852 IPR000048 GO:0005515
Apr4g0837 1529 SMART iq_5 757 779 IPR000048 GO:0005515
Apr4g0837 1529 SMART iq_5 782 804 IPR000048 GO:0005515
Apr4g0837 1529 SMART iq_5 734 756 IPR000048 GO:0005515
Apr4g0837 1529 Gene3D - 833 882 - -
Apr4g0837 1529 Gene3D - 786 832 - -
Apr4g0837 1529 Gene3D - 734 785 - -
Apr4g0837 1529 Coils Coil 975 1051 - -
Apr4g0837 1529 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 36 787 IPR027417 -
Apr4g0837 1529 PRINTS Myosin heavy chain signature 92 111 IPR001609 GO:0003774|GO:0005524|GO:0016459
Apr4g0837 1529 PRINTS Myosin heavy chain signature 149 174 IPR001609 GO:0003774|GO:0005524|GO:0016459
Apr4g0837 1529 PRINTS Myosin heavy chain signature 196 223 IPR001609 GO:0003774|GO:0005524|GO:0016459
Apr4g0837 1529 PRINTS Myosin heavy chain signature 429 457 IPR001609 GO:0003774|GO:0005524|GO:0016459
Apr4g0837 1529 PRINTS Myosin heavy chain signature 482 510 IPR001609 GO:0003774|GO:0005524|GO:0016459
Apr4g0837 1529 Gene3D - 667 733 - -
Apr4g0837 1529 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 8 57 IPR004009 GO:0003774|GO:0005524|GO:0016459
Apr4g0837 1529 CDD MyosinXI_CBD 1110 1495 IPR037975 GO:0007015
Apr4g0837 1529 ProSiteProfiles IQ motif profile. 783 812 IPR000048 GO:0005515
Apr4g0837 1529 ProSiteProfiles Dilute domain profile. 1159 1472 IPR002710 -
Apr4g0837 1529 ProSiteProfiles IQ motif profile. 758 786 IPR000048 GO:0005515
Apr4g0837 1529 SMART DIL_2 1347 1454 IPR002710 -
Apr4g0837 1529 Pfam DIL domain 1348 1451 IPR002710 -
Apr4g0837 1529 Gene3D - 252 310 - -
Apr4g0837 1529 Pfam Myosin head (motor domain) 64 720 IPR001609 GO:0003774|GO:0005524|GO:0016459
Apr4g0837 1529 ProSiteProfiles IQ motif profile. 735 763 IPR000048 GO:0005515
Apr4g0837 1529 Gene3D Myosin VI head, motor domain, U50 subdomain 312 601 - -
Apr4g0837 1529 ProSiteProfiles IQ motif profile. 854 883 IPR000048 GO:0005515
Apr4g0837 1529 ProSiteProfiles Myosin motor domain profile. 62 732 IPR001609 GO:0003774|GO:0005524|GO:0016459
Apr4g0837 1529 Coils Coil 916 957 - -
Apr4g0837 1529 Coils Coil 877 911 - -
Apr4g0837 1529 Pfam IQ calmodulin-binding motif 737 755 IPR000048 GO:0005515
Apr4g0837 1529 Pfam IQ calmodulin-binding motif 832 852 IPR000048 GO:0005515
Apr4g0837 1529 PANTHER MYOSIN 6 1526 - -
Apr4g0837 1529 PANTHER MYOSIN-9 6 1526 - -
Apr4g0837 1529 SMART MYSc_2a 57 733 IPR001609 GO:0003774|GO:0005524|GO:0016459
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0837 Apr-Chr4 6750609 6763003 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g0837 1 1529 Myosins gene family AT1G54560 82.418 0.0 2680
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0837 K10357 - gmx:100816792 2727.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0837 4 6750609 6763003 Apr4g0837 4 6750609 6763003 ECH
Apr4g0837 4 6750609 6763003 Apr8g0383 8 3222311 3242501 PCT