Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0827 ATGCATGCTAGTGCAAAGAGTGTCTTGCTTTCCCTTGTTTGCATCTCTGTTTTGGTGCATGGGATTCATGCTGAATGGAGAGAGGAGACAGGTTCTTTGGTCTTAGGTTGTGGGTTGGATGAAGGAGGTGCCAAAGATAATGATGGAAGGCAATGGAGTCCTGACAACAAGTTTCTGGAGGCAAATAGTGATTCAAAAACATCCAAAGCCTCATACCAAGACCCTTCCCTTACATCTGAGGTTCCATACATGTCTGCACGAGTTTTCTCATCTGAGACAAAATACAATTTCCCTGTTCAACCTGATAAGCGCTATTGGCTCAGGCTTCATTTTTATCCCTCTCTTTACGGCAGTTTCAACCCCTCTGATTCATATTTTTCAGTGACTGCAAATGGGGTTACCCTCCTCTCCAATTTCAGCGCTTCAATCATTTGTGAGGCCCTCTCACAAGCCTACATCGACAGAGAGTATTCCCTTGCTCCTTTGAATACAGACACTTTGACCCTCACCTTCAAGCCTTCTGACAAGTCCAATGGGGCTTTTGCATTCGTGAATGGCATTCAGTTGATCCCAATGCCCGAGTTGTTTGATTCCGCTGCATTGGTAGGGATGTCTGACCAAACCATGGATGTCAAGAGCTTGAATTTGCAAACCATGTTTAGACTTAATGTTGGTGGACAGTATATATCTCCTACCCAAGATTCTGGCCTTACAAGGATGTGGTATGATGACACACCTTACCTTTTTGGTGCAGCCACTGGTGTCACCAACCAGGCTGAGAAGGATGTTTCCATCAACTACCAGACCATGCCACAGTACATTGCCCCTCCTAATGTCTACTCCACATCAAGATCAATGGGGAATGATAAGGATGTCAACATGGGCTATAATCTCACTTGGATGTTCCATATCGATCCTAATTCCATGTACCTTACAAGGTTGCATTTCTGTGATTACTATTATTCCAAGATCAATGAGATTGTTTTCAACATATTTGTCAACAACCAAACGGCACAAGTTGAGGCGGATGTGATTGGGTGGACAGGAGGCAAAGGCGTGCCAACTTATAAGGACTATGTGGTGTATGTCCAAGGTGGGGAGGGTGATCAGCACCTATGGCTAGCTCTTCATCCTGCACCTGAGACCAAGCCAGAGTACTATGATGCCATACTCAATGGGGTGGAGATATTCAAGCTCAATGACAGAGACTTGTCTGCTCCTAATCCTACTCCTTCGGAATTGCTCCTCCAGCAGGAAGAGGAGGATGCAGGTTTCACAAACAGCAGAGGATATCACAAGACTGCTGTTATTGGTGGAGCTGCTGGAGGTGCTGCGGGTGCTGCCTTCATGGCTGTAATATGTGTTGCTGTCTACAACAAGAAGAAGAGAGCACCAGGGTCATATACTCACACAAGCTGGTTGCCTCTTTATTTGAACTCAAACGCGAATAGCAGCAAATCCACCTCGTGTGGGAAGAGCATTAATAGTGCCAACTTATCTGCCATGGCTCAAGGTCTTTGCCGCTATTTCTCCTTACAAGAGATAAAGAAAGCAACCAAGAATTTTGATGAGGCCAACGTTATTGGGGTTGGTGGATTTGGAAAGGTGTACAAGGGTGACATTGATAATGGAATTAAGGTGGCAATTAAGAGGTCAAACCCGCAGTCAGAACAAGGAGTTAATGAATTCCAAACTGAAATTGAGATGCTTTCAAAGCTGAGACACAAGCATTTGGTATCCTTGATTGGATTTTGTGAAGAAAATGATGAGATGTGCCTGGTTTATGACTACATGGCTCTTGGCACCTTTAGGGAACATCTTTACAAGGGCAACAAGCCAATGGCTACTCTATCATGGAAGCAACGGTTGGAGATTTGCATTGGAGCAGCAAGAGGGCTTCACTACCTTCACACAGGGGCCAAGTACACCATCATTCATAGAGATGTCAAAACAACAAACATTCTCTTGGATGAAAACTGGGCTGCCAAGGTTTCAGATTTTGGGTTGTCAAAAACGGGTCCAAATATGAATACTGGTCACGTTAGTACTGTGGTGAAGGGTAGTTTTGGCTATTTGGATCCTGAATACTTCAGGAGGCAACAGTTGACTGAAAAATCTGATGTATACTCATTTGGGGTTGTTCTGTTTGAAGCCCTTTGTGCAAGGCCTGCTCTGAATCCTAGTCTTCCAAAGGATCAGGTTAGTCTTGCAGAATGGGCATTGCTCTGCAAGCAAAAAGGAACTCTAGAGGATATCATTGATCCCTGCCTCAAAGGAAAGATTAATCCAGAAAGCTTGAAGAAGTTTGTAGACAGTGCTGAAAAGTGTTTGTCTGATCATGGTGTTGATCGTCCCTCCATGAATGATCTATTGTGGAATCTCGAATTTGCTCTCAACCTGCAAGATAACGAAGGTGGTTCAACTCGCCCTGCACGTGTTGAAGAGAGTGAGTTTGAAGAAATAAGCTTGGGGGACAACGACATGGCAAACCATTATAAAAACCTGAGCCTTGGAAGTGAGCATGAGCTTGACCATGATTCCAATATGAATTCCAATCCCACCTTCTCACAACTTGCCAATCAAAGCGGCCGATAA 2595 0.4443 MHASAKSVLLSLVCISVLVHGIHAEWREETGSLVLGCGLDEGGAKDNDGRQWSPDNKFLEANSDSKTSKASYQDPSLTSEVPYMSARVFSSETKYNFPVQPDKRYWLRLHFYPSLYGSFNPSDSYFSVTANGVTLLSNFSASIICEALSQAYIDREYSLAPLNTDTLTLTFKPSDKSNGAFAFVNGIQLIPMPELFDSAALVGMSDQTMDVKSLNLQTMFRLNVGGQYISPTQDSGLTRMWYDDTPYLFGAATGVTNQAEKDVSINYQTMPQYIAPPNVYSTSRSMGNDKDVNMGYNLTWMFHIDPNSMYLTRLHFCDYYYSKINEIVFNIFVNNQTAQVEADVIGWTGGKGVPTYKDYVVYVQGGEGDQHLWLALHPAPETKPEYYDAILNGVEIFKLNDRDLSAPNPTPSELLLQQEEEDAGFTNSRGYHKTAVIGGAAGGAAGAAFMAVICVAVYNKKKRAPGSYTHTSWLPLYLNSNANSSKSTSCGKSINSANLSAMAQGLCRYFSLQEIKKATKNFDEANVIGVGGFGKVYKGDIDNGIKVAIKRSNPQSEQGVNEFQTEIEMLSKLRHKHLVSLIGFCEENDEMCLVYDYMALGTFREHLYKGNKPMATLSWKQRLEICIGAARGLHYLHTGAKYTIIHRDVKTTNILLDENWAAKVSDFGLSKTGPNMNTGHVSTVVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEALCARPALNPSLPKDQVSLAEWALLCKQKGTLEDIIDPCLKGKINPESLKKFVDSAEKCLSDHGVDRPSMNDLLWNLEFALNLQDNEGGSTRPARVEESEFEEISLGDNDMANHYKNLSLGSEHELDHDSNMNSNPTFSQLANQSGR* 865
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0827 864 PANTHER OS07G0166700 PROTEIN 21 850 IPR045272 GO:0004714|GO:0006468
Apr4g0827 864 Pfam Malectin-like domain 36 398 IPR024788 -
Apr4g0827 864 MobiDBLite consensus disorder prediction 841 864 - -
Apr4g0827 864 SMART serkin_6 522 797 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr4g0827 864 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 21 850 - -
Apr4g0827 864 ProSiteProfiles Protein kinase domain profile. 522 797 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr4g0827 864 Gene3D - 35 192 - -
Apr4g0827 864 Gene3D - 214 400 - -
Apr4g0827 864 SUPERFAMILY Protein kinase-like (PK-like) 498 797 IPR011009 -
Apr4g0827 864 ProSitePatterns Protein kinases ATP-binding region signature. 528 550 IPR017441 GO:0005524
Apr4g0827 864 MobiDBLite consensus disorder prediction 848 864 - -
Apr4g0827 864 Pfam Protein tyrosine and serine/threonine kinase 526 723 IPR001245 GO:0004672|GO:0006468
Apr4g0827 864 Gene3D Phosphorylase Kinase; domain 1 481 597 - -
Apr4g0827 864 MobiDBLite consensus disorder prediction 803 824 - -
Apr4g0827 864 CDD STKc_IRAK 528 795 - -
Apr4g0827 864 Gene3D Transferase(Phosphotransferase) domain 1 598 811 - -
Apr4g0827 864 ProSitePatterns Serine/Threonine protein kinases active-site signature. 644 656 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0827 Apr-Chr4 6653345 6655939 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g0827 30 864 Receptor kinase-like Gene Family AT3G51550 53.563 0.0 853
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Apr4g0827 Malectin_like 1.2e-35 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0827 - - gmx:102659961 1460.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0827 4 6653345 6655939 Apr8g1531 8 24754530 24757124 PCT