Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Apr4g0819 | ATGGCGGGTAATTGCACGGAGGGTTTAGGTGATGATTTTTTGGAGCAGATGTTGGTATTACCTTCAGTGTATAGCGAGAGTGGTGGGTACGACTTTGGGAGGAGCGTAGGAAGCATGGCAATAGGTGTGGGCATGCCTTTGGAGTTTAATTTGGAGCATGGCTTTCTCAGACACCAACAAAGTAGTGTTGGTGGTAATGACTACGATCACCTTCCTCTCAATAATGCTAACAACACCACTACCTCATCCTCTTCTTCTTCAGGAATCACTGAAAGGGATTCGATGCATATGAGGGGTCTGTATACAACGTTGGGACAGCTGCATGGTCACGGCGGTGCCCAATCTACGGTGCCGTCTCCTGCTCCATTACTTCCGCCGCATCACCGTCAGTTGCAGCCCCATCATGGGCAGCCACCAGCTCCAGTATCTGTTGCTGCTGTTCCACAAGCAAGTGGCATACGCCCTCGAGTGCGAGCAAGAAGAGGTCAAGCCACAGATCCACACAGTATTGCTGAGCGATTACGTCGTGAAAGAATCGCTGAAAGAATGAAGGCCTTGCAGGAACTAGTTCCCAGCGCCAATAAGACGGACAGAGCAGCCATGCTTGACGAAATTGTGGATTATGTCAAGTTCTTAAGGCTCCAGGTTAAGGTCCTTAGCATGAGTAGATTGGGAGGAGCTGGTGCAGTTGCTCAGCTTGTGGCTGATGTTTCCCCTTCTGCATTGGAGGGTGAGGACATAGTAGGTGGAGCCAATAAGCAAGCTTGGGACAAGTGGTTCAATGATGGCACAGAACAGGAAGTTGCTAAACTTATGGAAGAAGATGTTGGAGCTGCTATGCAATTTCTTCAGTCCAAGGCACTTTGCGTCATGCCAATATCTCTAGCATCAACCATTTTTGGTACTTCCATATCAGAACCACCATCACTCCTCACGCCTGAATCAAACAGTTGA | 954 | 0.4885 | MAGNCTEGLGDDFLEQMLVLPSVYSESGGYDFGRSVGSMAIGVGMPLEFNLEHGFLRHQQSSVGGNDYDHLPLNNANNTTTSSSSSSGITERDSMHMRGLYTTLGQLHGHGGAQSTVPSPAPLLPPHHRQLQPHHGQPPAPVSVAAVPQASGIRPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPSANKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAQLVADVSPSALEGEDIVGGANKQAWDKWFNDGTEQEVAKLMEEDVGAAMQFLQSKALCVMPISLASTIFGTSISEPPSLLTPESNS* | 318 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Apr4g0819 | 317 | PANTHER | DEHYDROGENASE, PUTATIVE, EXPRESSED-RELATED | 7 | 307 | - | - | |
Apr4g0819 | 317 | SMART | finulus | 169 | 218 | IPR011598 | GO:0046983 | |
Apr4g0819 | 317 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 163 | 212 | IPR011598 | GO:0046983 | |
Apr4g0819 | 317 | Gene3D | - | 158 | 220 | IPR036638 | GO:0046983 | |
Apr4g0819 | 317 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 161 | 222 | IPR036638 | GO:0046983 | |
Apr4g0819 | 317 | PANTHER | TRANSCRIPTION FACTOR BHLH83-RELATED | 7 | 307 | - | - | |
Apr4g0819 | 317 | MobiDBLite | consensus disorder prediction | 108 | 143 | - | - | |
Apr4g0819 | 317 | Pfam | Helix-loop-helix DNA-binding domain | 168 | 212 | IPR011598 | GO:0046983 | |
Apr4g0819 | 317 | MobiDBLite | consensus disorder prediction | 72 | 91 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Apr4g0819 | Apr-Chr4 | 6602527 | 6607673 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Apr4g0819 | 135 | 316 | Basic Helix-Loop-Helix Transcription Factor Gene Family | AT4G02590 | 70.109 | 1.73e-72 | 222 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | bHLH | Apr4g0819 | HLH | 8.3e-08 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Apr4g0819 | - | - | aprc:113863260 | 561.222 |