Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0814 ATGGAGCTTTTGGCAGACGAGGCGAGTCCAGAGTGGTTGAACAAAGGAGACAATGCATGGCAATTGATGGCAGCAACAGTGGTGGGTCTACAAAGCATTCCGGGGCTCGTAATCCTCTATGGAAGCATGGTGAAGAAGACATGGGCCATTAACTCTGCCTTCATGGCTTTCTATGCCTTTGCGGCCGTTCTCATTTGTTGGGTTGGGTGGGGTTTTCGCATGTCATTTGGCGAGAAAATGGTTTTCTTCTTGGGGAAACCGGGGGTGGCGTTGGATGAGAAGTTCCTTTTCGGGAAAGCTTTTTCGGGGCTCTTTCCTACGGCCACCATGGTGTTTTTTCAGGGTGTGTTTGCTGCGATCACTTTGATTTTGATAGCTGGTTCTTTACTTGGGAGGATGAACATTCGTGCGTGGATGCTCTTTGTGCCACTTTGGGTTACTTTTTCGTACACTGTTACTGCCTTCAGTATTTGGTGCCCCAACGGGTGGTTGGCGAAGCTTGGAGTTATTGATTTCTCTGGGGGATATGTTATTCACCTCTCTGCTGGCGTTTCTGGTTTTACCGCAGCTTATTGGGTGGGTCCACGATCGGAGAAGGACAGAGAAAGCTTCCCATCAAACAACATGATTGTGGTGCTTGCAGGCGCAGGCCTGCTTTGGATGGGTTGGAGTGGGTTCAACGGTGGAGGTCCCTTCGTGGTGAACACGGTGGCATCTCTCGCCGTCCTTAACACACACGTGTGCGCTGCCACTAGCATCATCGTCGGGGTCCTACTTGACACTTTCTACTTCCGCAAGCCCACTGTGTTTGGCGCCGTACAAGGCATGATCACTGGCCTCGTTTGCATCACACCTGCCGCAGGAGTAGTACAAGGGTGGGCAGCAATCTTAATGGGCTTGATCTCAGGAAGCATTCCCTGGTACACAATGATGGTAATCCATGATAAAGTCTCCTTCTTGAAGCAAATCGACGATCCCATGGCGGTGTTCCACACCCACGCCATAGCCGGTGCTCTTGGTGGCATTCTCACGGGCCTCTTAGCAGTGCCTAAACTGTGCCGTCTCTTCTACATGGTGCCAGATTGGGAAAAATACATTGGTCTCGCCTATGCCCTCCATGATGGTGCAACTCATGCGGGTTTAAGACAAATGGCCATCCAAGTTGGAGCCATTGTTTTTGTGATTTGCTTCAACTTTGTTACAACCACCTTGATTTGCTTGCTTGTGGGCATCATAGTACCACTCAGGCTTGACACCGATGTATTACAAATAGGTGACAAGGCATTGCATGGAGAGGAGGCTTTCGCCTTGTATGGTGCAAATTTTGAGAACCTGAAGCGCAATAAAATTTATGATACTCAAGATGTTTCATACAGTATTAGCGAGTCAAGGTCATTTGGCCAGATTCAAATGGCATAG 1419 0.4926 MELLADEASPEWLNKGDNAWQLMAATVVGLQSIPGLVILYGSMVKKTWAINSAFMAFYAFAAVLICWVGWGFRMSFGEKMVFFLGKPGVALDEKFLFGKAFSGLFPTATMVFFQGVFAAITLILIAGSLLGRMNIRAWMLFVPLWVTFSYTVTAFSIWCPNGWLAKLGVIDFSGGYVIHLSAGVSGFTAAYWVGPRSEKDRESFPSNNMIVVLAGAGLLWMGWSGFNGGGPFVVNTVASLAVLNTHVCAATSIIVGVLLDTFYFRKPTVFGAVQGMITGLVCITPAAGVVQGWAAILMGLISGSIPWYTMMVIHDKVSFLKQIDDPMAVFHTHAIAGALGGILTGLLAVPKLCRLFYMVPDWEKYIGLAYALHDGATHAGLRQMAIQVGAIVFVICFNFVTTTLICLLVGIIVPLRLDTDVLQIGDKALHGEEAFALYGANFENLKRNKIYDTQDVSYSISESRSFGQIQMA* 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0814 472 Pfam Ammonium Transporter Family 19 434 IPR024041 GO:0008519|GO:0016020|GO:0072488
Apr4g0814 472 ProSitePatterns Ammonium transporters signature. 171 196 IPR018047 GO:0008519|GO:0016020|GO:0072488
Apr4g0814 472 PANTHER AMMONIUM TRANSPORTER MEP2 2 471 IPR001905 GO:0008519|GO:0016020|GO:0072488
Apr4g0814 472 SUPERFAMILY Ammonium transporter 12 417 - -
Apr4g0814 472 PANTHER AMMONIUM TRANSPORTER 2 471 - -
Apr4g0814 472 Gene3D Ammonium transporter AmtB like domains 3 450 IPR029020 -
Apr4g0814 472 PRINTS Rhesus blood group protein signature 114 130 IPR002229 GO:0005887
Apr4g0814 472 PRINTS Rhesus blood group protein signature 210 228 IPR002229 GO:0005887
Apr4g0814 472 PRINTS Rhesus blood group protein signature 241 263 IPR002229 GO:0005887
Apr4g0814 472 PRINTS Rhesus blood group protein signature 296 314 IPR002229 GO:0005887
Apr4g0814 472 PRINTS Rhesus blood group protein signature 334 350 IPR002229 GO:0005887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0814 Apr-Chr4 6578315 6580413 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g0814 108 455 Inorganic Solute Cotransporters AT2G38290 53.714 4.26e-123 361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0814 K03320 - gmx:100782944 847.425
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0814 4 6578315 6580413 Apr4g0814 4 6578315 6580413 ECH