LGRPv2

Show entries

Search:

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Apr4g0809	ATGGAGAGCGCACTGCACAGTTCTGGCGATCAAACCCTTCAGGAATTCTTCAAAGTTTTCTTGCTCAAGACTGGTTCTGCCCAGTTGCAAATACCAAAATCATTCACCAAGTTCTTCAATGGAACCACACCATGCAAGGCCACTCTTGTAGACCAAGATATAAACTCTAGGGATGATATTTGCTTGGAGAAAGTCGAGGATCGCTTGGTTTTCAAAAGCGGGTGGGAGCAATTTGCTAAGGAGAAAGGTTTAGAAGAAGGGGACTTCTTGGTTTTTCAGTATGATGGAAACTCTTCGTTTTATGTGAAGATATTTTCGAAAACTGGGTGCAGGAAAGTAGCCGCACCTCCACCTCCACCTGCACCTGCATGTTGCGAAAAAGTTGCTGTTCCCATTGTGATTTTGGATGAAGATTCTAATCTGAATAGTAAGAAAAACCGGCGGGGTCGTAAACGGAAAAATCTATCAACAACAGTCCTTAAAACAAATGAGAATAAAAAACCAGTGTTAGAGGGTCCTTCTGAAGGTGCTCAGAGCAAATTAAATGGAGTTAAAGAAGAAAATGTTAACCGCTATGAGATGAAACCTGATCTGGCAAACTTGGATCCACCGTGGAACCCTCATTTTTCGATATGCTTAACTGCATGGAAACTGAATAGAGTGGAAATTCCTAGACTAGTGCTGAAGAAATTTAATATCATTCTGACCCCAAGGATAAGTATAAGAGATGAGAATGACAATTTATGGCCGGTGGCGATCATCACCACGGCACCTGCCGTCGTCATTTTTTGTCCGATGGATGGTCCAATTTCAGGCGGAGCAACAACATTCACGAAGGTCAATGGTGTGATTTTCAGTTTGTTATTGACAAAGCAAACATAA	882	0.4195	MESALHSSGDQTLQEFFKVFLLKTGSAQLQIPKSFTKFFNGTTPCKATLVDQDINSRDDICLEKVEDRLVFKSGWEQFAKEKGLEEGDFLVFQYDGNSSFYVKIFSKTGCRKVAAPPPPPAPACCEKVAVPIVILDEDSNLNSKKNRRGRKRKNLSTTVLKTNENKKPVLEGPSEGAQSKLNGVKEENVNRYEMKPDLANLDPPWNPHFSICLTAWKLNRVEIPRLVLKKFNIILTPRISIRDENDNLWPVAIITTAPAVVIFCPMDGPISGGATTFTKVNGVIFSLLLTKQT*	294

Showing 1 to 1 of 1 entries

Show entries

Search:

Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Apr4g0809	293	Gene3D	-	7	110	IPR015300	-
Apr4g0809	293	ProSiteProfiles	B3 DNA-binding domain profile.	14	108	IPR003340	GO:0003677
Apr4g0809	293	PANTHER	B3 DOMAIN-CONTAINING	8	255	-	-
Apr4g0809	293	CDD	B3_DNA	16	106	IPR003340	GO:0003677
Apr4g0809	293	Pfam	B3 DNA binding domain	16	107	IPR003340	GO:0003677
Apr4g0809	293	PANTHER	B3 DOMAIN-CONTAINING PROTEIN OS01G0723500-LIKE ISOFORM X1	8	255	-	-
Apr4g0809	293	SMART	B3_2	17	108	IPR003340	GO:0003677
Apr4g0809	293	SUPERFAMILY	DNA-binding pseudobarrel domain	15	110	IPR015300	-

Showing 1 to 8 of 8 entries

Show entries

Search:

Select	Gene	Chromosome	Start	End	Duplicated_type
	Apr4g0809	Apr-Chr4	6547529	6551827	Transposed

Showing 1 to 1 of 1 entries

Show entries

Search:

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Apr4g0809	15	254	B3 DNA Binding Superfamily	AT5G66980	30.451	1.97e-20	87.8

Showing 1 to 1 of 1 entries

Show entries

Search:

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	B3	Apr4g0809		B3	2e-15	CL0405

Showing 1 to 1 of 1 entries

Show entries

Search:

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Apr4g0809	-		-	aprc:113861577	561.607

Showing 1 to 1 of 1 entries