Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0805 ATGTTCGATGGAGCAGCAGATCAGTTCCACCAATTCATAGCACCAAGGACCACTCTTCCTCTTCACTTATCTTTCCCTCTTCATGCTTCTGCCACCCCTAATAGCTTCCTACCCTTTGATCCTTACAACCCTTCTCATCAATTCCCATTCCAAACCAATCTTTTGCACCCATTGCACCCCCACAAAGATGAAGAGAAGGAACCAAACACCATGGACATGGTTCCTTCAATCAACAACGTCGAGATTCAAAGAGATCAAAGACAATCAACACAGTTAACTGATTCCTGGACTAACGATGAAGTTCTTGCACTGCTGAGGATCAGATCTAGCATGGAAAATTGGTTCCCACAGCTGACATGGGAGCATGTCTCAAGGAAGCTAGCAGAGCTTGGGTTCAAGAAGGGTGCGGAGAAATGCAAGGAGAAGTTTGAAGATGAAAGTAGATATTTCGACAACATTGATGACTATGGCAAGAACAATTACCGGTTCCTTAGTGAGCTTGAGGAGCTTTGTCACGGTGATAAAAACCCTGATCAGGGTGGTGATGATGGGGTTGTGAGTGAAAAGACACACCACCTAGGTGGAGACAACATGGGCCACGCGTTGGAAGAAAATTCGAGAGACATTATTGGAGCACAGGCGACCAAACAATGTGATGGAAGTGACAAGGTCGTGGAAAAGTCAAAGGAGCGGAAGAGGAAGAGAAAGGATAGGTTTGAGATGTTCAAGGGTTTTTGTGAGAGTGTTGTGAACAAGATGATGGCTCAACAAGAAGAGATACACAACAAGCTCCTCGATGACATGATGAAAAGGGACCAAGAGAAGTTTGCGAGGGAGGAAGCGTGGAAGAAGCAAGAGATGGATAAGATGAACAAGGAACTTGAGATTATGGCACATGAGCAAGCTATTGCGGGTGATAGGCATACCACCATCATTGAATTCTTAAAGAAATGTGCAACAACTTCCCCTCCAAGCCAAAATGGTGAGTACAAAACGAATGGTTCAAATCGAAATTGTCTACGCACTACTATCTCTTCTTCTTCCCCTCAAAACCCTAATAATCCTTCTACTGAAGAGAACAATCTTGACTCAAGTGACACATTATTACAAGTTCCTTCTTCTTCCAATTCATCTCCAGCTCCTCACAACCCTACTTCTTCGCTCAATAGCCACAATAATCAATTAGAGTCAAACTCAGTTTCGATAAATAAGGCCACGTCAACCCTTATGACCACTACTGAGAAAGACGACGTTGGGAGGAGATGGCCAAGAGATGAAGTATTAGCACTGATAAACCTGAGGTGCACAAGTCTAAGTAACAACAATAATGAAGAGAAAGAAGGAAACAACAAGGCTCCTCTGTGGGAGAGAATCTCGCAAGGGATGTCAGATCTGGGATACAGGAGAAGTGCAAAGAGGTGCAAAGAGAAATGGGAAAACATAAATAAGTACTTCAGAAAAACAAAGGATGTTAACAAGAAAAGGTCCCTTGACTCTAGGACCTGTCCCTATTTCCATCAACTTAGCTGTTTATATGGTCAGGGAAAACTCGTGCTACAATCTGAAAGGCAAGGGAACCACTTCAATCCAACCGCGAATACCGCTCAAGTGCCGCCAGATCAAGCTCAAGCTGATGAGTCTTCTCAAGTGGGGTCTGGTCCTCTGATTCAGTATGCATGTTGA 1683 0.4391 MFDGAADQFHQFIAPRTTLPLHLSFPLHASATPNSFLPFDPYNPSHQFPFQTNLLHPLHPHKDEEKEPNTMDMVPSINNVEIQRDQRQSTQLTDSWTNDEVLALLRIRSSMENWFPQLTWEHVSRKLAELGFKKGAEKCKEKFEDESRYFDNIDDYGKNNYRFLSELEELCHGDKNPDQGGDDGVVSEKTHHLGGDNMGHALEENSRDIIGAQATKQCDGSDKVVEKSKERKRKRKDRFEMFKGFCESVVNKMMAQQEEIHNKLLDDMMKRDQEKFAREEAWKKQEMDKMNKELEIMAHEQAIAGDRHTTIIEFLKKCATTSPPSQNGEYKTNGSNRNCLRTTISSSSPQNPNNPSTEENNLDSSDTLLQVPSSSNSSPAPHNPTSSLNSHNNQLESNSVSINKATSTLMTTTEKDDVGRRWPRDEVLALINLRCTSLSNNNNEEKEGNNKAPLWERISQGMSDLGYRRSAKRCKEKWENINKYFRKTKDVNKKRSLDSRTCPYFHQLSCLYGQGKLVLQSERQGNHFNPTANTAQVPPDQAQADESSQVGSGPLIQYAC* 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0805 560 PANTHER TRIHELIX TRANSCRIPTION FACTOR GTL2 13 553 - -
Apr4g0805 560 Gene3D - 96 152 - -
Apr4g0805 560 Gene3D - 422 487 - -
Apr4g0805 560 MobiDBLite consensus disorder prediction 526 552 - -
Apr4g0805 560 ProSiteProfiles Myb-like domain profile. 421 482 IPR001005 -
Apr4g0805 560 PANTHER - 13 553 - -
Apr4g0805 560 MobiDBLite consensus disorder prediction 320 395 - -
Apr4g0805 560 Pfam Myb/SANT-like DNA-binding domain 420 508 IPR044822 -
Apr4g0805 560 Pfam Myb/SANT-like DNA-binding domain 94 158 IPR044822 -
Apr4g0805 560 CDD GT1 420 489 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0805 Apr-Chr4 6531385 6534585 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g0805 96 514 Trihelix Transcription Factor Family AT5G28300 41.837 2.55e-92 293
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Apr4g0805 Myb_DNA-bind_4 1.6e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0805 - - gmx:100795995 764.992
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0805 4 6531385 6534585 Apr4g0805 4 6531385 6534585 ECH
Apr4g0805 4 6531385 6534585 Apr8g1513 8 24456787 24459622 PCT