Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0798 ATGAATGGTGTGAAAGAGTTTGAAACGGATTGCTCTGAGTTTGTTGAGGTTGATCCAACTGGCAGATATGGCAGAGTCAAATTGTATGATTTTCTGCAAAGCCCTGAAGATCTTGAGAGGCTTTACTGTGAAATTCATCTCTTGAAGACGTTGAAGCACAGAAACATAATGAAATTTTACACATCTTGGGTAGATACTGCAAATAGGAATATCAACTTCGTCACTGAGATGTTCACTTCTGGGACTCTTAGACAGTATAGGCTAAAGCATAAGAGAGTTAATATCAGAGCGGTGAAGCATTGGTGTAGACAGATCCTTAGAGGACTTCTCTATCTTCATAGCCATGACCCACCTGTGATCCATAGAGATCTCAAATGTGATAATATTTTTGTCAATGGAAACCAAGGGGAAGTGAAGATTGGAGATCTTGGCTTGGCTGCAATTCTACGGAAGTCTCATGCTGCTCATTGCGTAGGAACGCCCGAGTTCATGGCACCAGAAGTATATGAAGAGGCATATAACGAATTAGTTGATATATATTCCTTTGGTATGTGCATATTAGAAATGGTCACATTTGAATATCCTTATAGCGAATGCAGCCATCCGGCTCAAATCTACAAAAAAGTTATTTCTGGTAAGAAACCAGACGCTTTGTATAAGGTGAAGGATCCAGAAGTGCGTCAATTTGTTGAGAAATGCCTGGCGACAGTGTCCTTAAGACTCTCTGCAAGGGAGCTTCTAGATGATCCTTTTCTCCAAATCGATGATTATGAGTATGATTTGGGTCCGACAGACAGTGGATCATTTGATGACTTGGGTCCTCTTATCCATCAGCCATTCTTTGATCTCCGCCAGAGCTATAGTAATTTAAGTTCTGAATATTCAAATGGTTTTGGGTATGAAGGAGACTGGTATTCTCAACCAGCTGAGATTGAACCAAGTGGAATCGAACTTTTTGAGTGCCATGATGATGAATCCGAAGACGTTGACATAAGCATCAAAGGCAAGAGGAAAGATGATGGCAGCATCTTTTTGAGACTCAGAATTGCAGACAAAGAAGGCCGTATTCGAAATATTTATTTCCCATTTGACATAGAGATCGACACAGCACTAAGCGTAGCAGCTGAAATGGTTGCAGAGCTCGACATTACTGACCAAGATGTTAACAGAATAGCAGATATGATAGACGGGGAAATAGCTTCCTTGGTACCTGAATGGAAGCCAGGACCAGGATTTGAGGAAACTAACCATTTTGTAGATAAAAATTGTTGTCACTATTGTGTGTCTAATAATACTTCTGGTGACAATGTTATGAATTTTCTTACACATAATCAAGGTGGAAAGAACTCGCAGCTTCCTCAATGCTGTCGGCATGGATGTACTTCAATGCATGGGCGATTTGAGGAGATTACCTTTCAATCTGAGGAGTATGACAATCATGTTGGAGGGGATGCACCGACCAAATCAAGCCAATCAGACTGCTTGCAGTATGAGGAACTATGGAATCATCATGAAAGTTGTGAACTGAGTCCAGTAGAGTCTGATCAGAGCCACTCTGATGAACAATGTGAGCAGTTAGATAAATCAGTTTTAGCAGAAGATAAAGGAAAGGGTGGTTGGGAAAACAAGTTTGCACCAGATGCAGGAAACTCCTTACGAAGTTTATCAGGAAATTATTTCTCTACTATGTGTTCATTATATTCTGGCCTTGAGAATGAATATGAGAAAGAGGTTCAACAAGAATTAAGATGGATCAAAGCAAAATACCAAATGAAGTTAAGGGAACTTGGGGATAAACCGTTCAGTATAGCAGCTAAATCTTCACATACTAGTGATAAAAAGCACAAAACAGAACAAGCCATTATGCTACCTTCCCTTACACAAACAGTAAACGAAATTGACCATGGGATTCGCTTAAAACCATTAGGTAATTACTGGAATGGTGATTCCAATTGCCATTCTCAAGTCCAAAAGCGGCACCCCAATTTGGACACCCAAAGGGCCCAAAATTGTGAGGTGATGTGTTCCCATGAAGAAGGTATGGTTATAACTAAGAGTTTATTCACAGGGTCGTTGCTTCCAGACACACTACACAGAACAGTCTCCCTTCCAGTTGATGCTGTGGATTTATAA 2133 0.4041 MNGVKEFETDCSEFVEVDPTGRYGRVKLYDFLQSPEDLERLYCEIHLLKTLKHRNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKHWCRQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTPEFMAPEVYEEAYNELVDIYSFGMCILEMVTFEYPYSECSHPAQIYKKVISGKKPDALYKVKDPEVRQFVEKCLATVSLRLSARELLDDPFLQIDDYEYDLGPTDSGSFDDLGPLIHQPFFDLRQSYSNLSSEYSNGFGYEGDWYSQPAEIEPSGIELFECHDDESEDVDISIKGKRKDDGSIFLRLRIADKEGRIRNIYFPFDIEIDTALSVAAEMVAELDITDQDVNRIADMIDGEIASLVPEWKPGPGFEETNHFVDKNCCHYCVSNNTSGDNVMNFLTHNQGGKNSQLPQCCRHGCTSMHGRFEEITFQSEEYDNHVGGDAPTKSSQSDCLQYEELWNHHESCELSPVESDQSHSDEQCEQLDKSVLAEDKGKGGWENKFAPDAGNSLRSLSGNYFSTMCSLYSGLENEYEKEVQQELRWIKAKYQMKLRELGDKPFSIAAKSSHTSDKKHKTEQAIMLPSLTQTVNEIDHGIRLKPLGNYWNGDSNCHSQVQKRHPNLDTQRAQNCEVMCSHEEGMVITKSLFTGSLLPDTLHRTVSLPVDAVDL* 711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0798 710 CDD STKc_WNK 34 252 - -
Apr4g0798 710 Gene3D Phosphorylase Kinase; domain 1 26 76 - -
Apr4g0798 710 SMART serkin_6 12 252 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr4g0798 710 ProSiteProfiles Protein kinase domain profile. 1 252 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr4g0798 710 Gene3D - 341 408 - -
Apr4g0798 710 Pfam Protein kinase domain 37 252 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr4g0798 710 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 26 699 - -
Apr4g0798 710 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 344 398 IPR024678 GO:0004674|GO:0005524
Apr4g0798 710 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK1 26 699 - -
Apr4g0798 710 SUPERFAMILY Protein kinase-like (PK-like) 22 253 IPR011009 -
Apr4g0798 710 Gene3D Transferase(Phosphotransferase) domain 1 78 257 - -
Apr4g0798 710 ProSitePatterns Serine/Threonine protein kinases active-site signature. 119 131 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0798 Apr-Chr4 6483829 6487347 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g0798 98 599 MAP Kinase Kinase Kinase AT3G04910 59.559 0.0 580
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Apr4g0798 Pkinase 6.5e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0798 K08867 - gmx:100790554 1185.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0798 4 6483829 6487347 Apr4g0798 4 6483829 6487347 ECH
Apr4g0798 4 6483829 6487347 Apr8g1505 8 24314415 24318705 PCT