Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0794 ATGGCTTCTCAACAACACGACACCGTTTTCCCCGAAGAAGAAATGGACGACGACGATGAGGAATCTCAGGAGGACGAAGAAGAGGAAGAAGACGACGACGACGTTTTGGTCGACGACGAAGAAAACGAACCTTCTCCTTCTGCCTCCTCCGCTCTCGCCGTCACGGTCGCCGTTCCCGGTTCCACCGTATCCAATGGAGGAAACGCTCCAATTTCCGCCGCCACCGCCACCGCCACCACAATCGTTGTCCACGACTCCCCCGATCCGAAACGGCGGCGCGTGGAACAAATCGAGGAGAAAAAACCGTTAGACGATTCGCGGAGGCTGTTTCAGCGACTGTGGACCGACGAGGACGAGATCGAGCTCTTGCAAGGTTTCCTCGACTACACCTCACAGCGAGGATCCTCTCACCACAACGACACCGCTTTGTTCTACGACCAAATCAAGTCAAAGCTCCAACTCGATTTCAACAAGAACCAGCTCGTCGAGAAGATCCGAAGGTTGAAGAAGAAATACCGAAACGTCCTCAACAAAATTGGCTCCGGCAAGGAATTTTCCTTCAAAAGCGCTCACGATCAAGCCACCTTCGAAATATCTCGCAAGATCTGGAGCAACATGGCCCCGATCGGCGACAATTCCATGGACGACGACGAAATCAACCTCAACCCCATCCCTAACCCTAACCCTAATCCGAATCTTAATTTTAGCCCCATAGTCCCGAAGAACGAAGTCATGTTCGGAAATTCGGTGGAGAAGAAAACACGGAAACGCTCTCGGCCTCGATCGGCGATCAAAGTCGACGAGAAGCGCGAGTCAATTGATGGATCGGCGTCGAACAAGGATCAGAATTGTATCAGAAATGCTACCACTACCGCTACCGCTACAGCTACTGCTACTCCTATTACTAATACCAACAATAATAGTAATTGTAACAGTGGTTATAGCAATAGCATACCGAGTTTGATTGAAGAGACAGTGAGGAGGTGTTTGTCGCCGTTGTTAAAGGAGTTGGTGGGTGGGGCCATGGCGGGGCCGTTTGGAGCGAGAGGGTTGAATTTGAACCCAGTGCCGTTGATGAATTTGAATTTTGGAGGTGGGGATTTGGTGGATGAGAAATGGAGGAAGCAACAAATTTTGGAGTTGGAAGTGTATTCAAAGCGGTTGGAGCTTGTGCAGGATCAGATCAAGGCTACCATGGAGGAGTTGAGGTCAAGTGGTGGAGGAGGAGGAGGTTGA 1236 0.5073 MASQQHDTVFPEEEMDDDDEESQEDEEEEEDDDDVLVDDEENEPSPSASSALAVTVAVPGSTVSNGGNAPISAATATATTIVVHDSPDPKRRRVEQIEEKKPLDDSRRLFQRLWTDEDEIELLQGFLDYTSQRGSSHHNDTALFYDQIKSKLQLDFNKNQLVEKIRRLKKKYRNVLNKIGSGKEFSFKSAHDQATFEISRKIWSNMAPIGDNSMDDDEINLNPIPNPNPNPNLNFSPIVPKNEVMFGNSVEKKTRKRSRPRSAIKVDEKRESIDGSASNKDQNCIRNATTTATATATATPITNTNNNSNCNSGYSNSIPSLIEETVRRCLSPLLKELVGGAMAGPFGARGLNLNPVPLMNLNFGGGDLVDEKWRKQQILELEVYSKRLELVQDQIKATMEELRSSGGGGGG* 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0794 411 Coils Coil 381 401 - -
Apr4g0794 411 MobiDBLite consensus disorder prediction 261 276 - -
Apr4g0794 411 Coils Coil 158 178 - -
Apr4g0794 411 MobiDBLite consensus disorder prediction 1 52 - -
Apr4g0794 411 PANTHER BNAANNG10740D PROTEIN-RELATED 1 406 IPR007592 GO:0006355
Apr4g0794 411 MobiDBLite consensus disorder prediction 11 41 - -
Apr4g0794 411 Pfam Protein of unknown function, DUF573 110 204 IPR007592 GO:0006355
Apr4g0794 411 MobiDBLite consensus disorder prediction 250 281 - -
Apr4g0794 411 PANTHER BNAANNG10740D PROTEIN 1 406 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0794 Apr-Chr4 6459068 6460725 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g0794 1 409 GeBP Transcription Factor Family AT5G28040 44.805 1.00e-94 289
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Apr4g0794 DUF573 1.7e-34 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0794 - - gmx:100779712 495.738
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0794 4 6459068 6460725 Apr8g1502 8 24165503 24166663 PCT