Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0788 ATGGCTTCATTATCTTCCTCTCTGAAATTTACAGCGAGAAGGTGCAAACCTGAGTTGGTAGCTCCTGCTAAACCTACTCCTCATGAACTCAAACTACTCTCCGACATAGATGACCAAGATGGCTTGCGTTTTCAGATTCCAATCATAATGATTTATCGTAACGAACCATCAATGGCAGGGAAAGACCCGGTTGAAGTGATTCGAGAAGGACTCGCTGAAACACTTGTGTTCTACTACCCATTTGCGGGTAGGATTAGGGAAGGGCATGATCGGAAGTTGATGGTGGATTGTACTGGGGAAGGTGTTATGTTCATTGAGGCTGATGCAGAGGTAACACTTGATCAATTTGGTGACTCTCTTGTACCTCCATTCCCATGCTTCGAAGAACTCCTATATGATGTTCCAGGTTCACAGGAGATTACTGACTGCCCCATTCTACTCATACAGGTCACACGGCTCAAGTGTGGTGGTTTCATCTTGATCGTCCGCTTAAATCACACCATGTGTGACGGAGCTGGTTTGTCACAATTCATGAATGCTTGGGCTGAAATTGCTCGTGGTGCTCGCCAACCTTCCATTCCACCTGTGTGGCAAAGGGAGCTTCTATTAGCAAGAGATCCACCTCGCATTACATGCAACCACCGCGAATACGAGCAATTTCCAAACACCAATGAAGGAACCGTTACTTCATACGAGAACAACATGGTTCTTCGATCTTTCTTCTTTGGACCCGCCGAGATGGCAGCCCTTCGTCGCTTGATTCCACATCACCTTCGCGCATGCTCCACATTTGATGTCATTACAGCATGCTTCTGGCTTTGTCGCACAAAAGCATTGCAAATAGACCTAGATGAGGATGTTCGCATGATGTGCATTGTCAACGCACGTGCGAGGTTCAATCCTCCTTTACCTGTTGGCTATTATGGCAATGCTTTTGTGTATCCGGCAGCAATCACCACTGCAAGGAAGCTTTGTGAAAATTCATTTGGGTATGCTGTGGAATTAATGAACAAAGTGAAAAGTGAGGTCAATGAGGAATATGTGCGTTCAGTGACAGATTTAATGGTTATAAAAGGACGATGCTTGTTTACAACTGTTAGGTCTTGTATTATATCAGATTTGACACGTAGCAGGTTTAGAGAAATTAATTTTGGGTGGGGTAATGCAGTCTATGGTGGAGTGGCCAAAGGTGGAGCTGGGTCTTTTCCGGCAGTAACTTTCCAAGTGCCATATAAAAATGCAAACGGAGAAGAAGGTATAATATTACCGATTTGGTTGCCCACCAAAGCTATGGAAAGGTTTGTGATAGAGTTAGGTGAGATGCTTGGGAACCAAAACCAACTTAAAAAGAGTGGTCCTCGTTCCATCATGTCAAGCTTGTAG 1383 0.4461 MASLSSSLKFTARRCKPELVAPAKPTPHELKLLSDIDDQDGLRFQIPIIMIYRNEPSMAGKDPVEVIREGLAETLVFYYPFAGRIREGHDRKLMVDCTGEGVMFIEADAEVTLDQFGDSLVPPFPCFEELLYDVPGSQEITDCPILLIQVTRLKCGGFILIVRLNHTMCDGAGLSQFMNAWAEIARGARQPSIPPVWQRELLLARDPPRITCNHREYEQFPNTNEGTVTSYENNMVLRSFFFGPAEMAALRRLIPHHLRACSTFDVITACFWLCRTKALQIDLDEDVRMMCIVNARARFNPPLPVGYYGNAFVYPAAITTARKLCENSFGYAVELMNKVKSEVNEEYVRSVTDLMVIKGRCLFTTVRSCIISDLTRSRFREINFGWGNAVYGGVAKGGAGSFPAVTFQVPYKNANGEEGIILPIWLPTKAMERFVIELGEMLGNQNQLKKSGPRSIMSSL* 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0788 460 PANTHER ALCOHOL ACYLTRANSFERASE 10 444 - -
Apr4g0788 460 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 10 444 - -
Apr4g0788 460 Pfam Transferase family 17 436 - -
Apr4g0788 460 Gene3D - 217 436 IPR023213 -
Apr4g0788 460 Gene3D - 13 216 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0788 Apr-Chr4 6410232 6411853 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g0788 43 438 Monolignol Biosynthesis Gene Families AT5G48930 28.049 3.71e-49 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0788 K19861 - gmx:100792864 700.279