Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0782 ATGATTCCAATTGAAATGAACAGGCTCCTGAATTTGGAAAGTTTACAACTATATGATAATAATTTTATAGGTCATTTACCTCACAACATTTGCATTAATGGAAAGTTGGCAAACTTCTCTGCCTATAATAATAAATTCACAGGCCCAATTCCACAGAGTTTGAAAAATTGCTCCAGCCTTATCAGAGTCAGGCTTCAGAAAAATCAACTAACTGGAGATATAACAGATGCTTTTGGTGTACTTCCAAATTTGAACTACATCGAATTGAGTGACAACAATTTCTTCGGTCATCTTTCACCAAACTGGGGAAAGTTCAGTAGCCTCGCAAGCCTAAAGATCTCCAACAATCATTTATCAGGAGTTATACCACCAGAACTAAGCAAAGCAACTAATTTGCAGTCACTTCACCTATCTTCAAACCATCTTACAGGAAACATTCCGCAAGAATTATGTAACTTGACCTTGTATGATCTAGCAATCAACAATAATAATCTTTCAGGAAATGTTCCCACACAAATAGCATCAATGAAGGAACTTGAAAAATTGGATCTTGGATCAAATAGTTTGATTGGCTTAATCCCAAAACAACTTGGAAAGTTGCTCAAATTGTTGATCTTAAATCTAAGCCAAAATGAATTCGAGGGAAATATTCCTTCTGAGCTAGGTGAACTGAAATCTCTTGGAAGTCTTGATCTTAGTGGAAATTCCTTGAGTGGAACAATACCACCAATGCTTGCAGAAATGACAATATTAGAAACATTGAATCTCTCGCACAATAATCTTTCAGGTGATCTCTCTAGCTTTGATGATATGATAGGCTTGACATCTATTGATATATCATACAACCAATTAGAGGGTCCACTTCCAAACATTCATGTGTTTCAAAATGTTACTATTGAAGCATTAAGAAATAATAAAGGCTTGTGTGGTAATGTCACTGGCTTAGAGCCTTGCCCAACATTAAGTGGGAAATCTCATAATCATAAGATTAAGAAAGTCATAATGATAGTTTTACCACTTACTTTGGGCACTCTAATACTTTCACTATTTGCTTTTGGAGTCTTGCATCATCTATGCCAACCTTCAAAGACAAAAGAAAACCAGGTTGCAAAATTTCAAACTCCAAACATATTTGGAATATGGAATTTTGATGGCAAAATGATGTTTGAGAATATTATTGAAGCCACAGAACAGTTTGATGACAAATATCTCATTGGGGTTGGAGGGCAAGGATGTGTTTACAAAGCAAAGTTACCAACGGGTCAAGTTGTTGCTGTGAAAAAACTGCATTCAATTCCAAATGAAGAAATGCTCAATCAAAAAGCTTTGGAAAGTGAAATCGAAGTGTTGACAAAAATTCGGCATCGTAACATTGTGAAGTTATATGGGTTTTGTTCACATCCACAATTTTCATTTTTGGTGTATGAGTTCCTGGAAAAGGGTAGTGTCGAGAAGATTTTGAAGGATGATGAAGAAGCGATTGCATTTGATTGGCATAAGAGGGTGAATGTTGTGAAAGGTGTAGCCATTGCCTTGAGCTATATGCACCATGATTGTTCACCTCCAATTGTTCATCGTGATATATCAAGCAAGAATGTTCTTTTAGATTTGGAATATGTAGCTCATGTCTCAGACTTTGGAACAGCCAAGCTTCTCAATCCTGATTCTTCTAATTGGACTTCACTCGTAGGAACCTTTGGATATGCTGCTCCAGAACTTGCTTACACAATGGAAGTAAATGAGAAATGTGACGTGTATAGTTTTGGAGTCTTAACATTGGAAATACTTTTTGGAGAACATCCTGGTGATGTTATATCTTCTTCACTGTTATCATCTTCATGCCCAGTTGTGCCTTCATCGCTTGATAACATGTCTTTGTCTTTGATGGATAAGTTGGACCAACGTCAACTTCATCCAACAAACCCTATTGCTAAGGAGATGTTAACCATTGCAAAGATAGCAATTGCATGCTTGACTGAAAGCCCACAATCTCGCCCTACCATGGAACAGATTGTTAAAATGCTTCAACGTGAAGGTCATCTTTAA 2046 0.3666 MIPIEMNRLLNLESLQLYDNNFIGHLPHNICINGKLANFSAYNNKFTGPIPQSLKNCSSLIRVRLQKNQLTGDITDAFGVLPNLNYIELSDNNFFGHLSPNWGKFSSLASLKISNNHLSGVIPPELSKATNLQSLHLSSNHLTGNIPQELCNLTLYDLAINNNNLSGNVPTQIASMKELEKLDLGSNSLIGLIPKQLGKLLKLLILNLSQNEFEGNIPSELGELKSLGSLDLSGNSLSGTIPPMLAEMTILETLNLSHNNLSGDLSSFDDMIGLTSIDISYNQLEGPLPNIHVFQNVTIEALRNNKGLCGNVTGLEPCPTLSGKSHNHKIKKVIMIVLPLTLGTLILSLFAFGVLHHLCQPSKTKENQVAKFQTPNIFGIWNFDGKMMFENIIEATEQFDDKYLIGVGGQGCVYKAKLPTGQVVAVKKLHSIPNEEMLNQKALESEIEVLTKIRHRNIVKLYGFCSHPQFSFLVYEFLEKGSVEKILKDDEEAIAFDWHKRVNVVKGVAIALSYMHHDCSPPIVHRDISSKNVLLDLEYVAHVSDFGTAKLLNPDSSNWTSLVGTFGYAAPELAYTMEVNEKCDVYSFGVLTLEILFGEHPGDVISSSLLSSSCPVVPSSLDNMSLSLMDKLDQRQLHPTNPIAKEMLTIAKIAIACLTESPQSRPTMEQIVKMLQREGHL* 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0782 681 Pfam Protein kinase domain 401 673 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr4g0782 681 ProSitePatterns Tyrosine protein kinases specific active-site signature. 523 535 IPR008266 GO:0004672|GO:0006468
Apr4g0782 681 ProSiteProfiles Leucine-rich repeat profile. 131 154 IPR001611 GO:0005515
Apr4g0782 681 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 2 676 - -
Apr4g0782 681 Gene3D Transferase(Phosphotransferase) domain 1 478 680 - -
Apr4g0782 681 ProSiteProfiles Protein kinase domain profile. 399 681 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr4g0782 681 Pfam Leucine rich repeat 226 284 IPR001611 GO:0005515
Apr4g0782 681 Pfam Leucine rich repeat 82 142 IPR001611 GO:0005515
Apr4g0782 681 Gene3D Ribonuclease Inhibitor 1 320 IPR032675 -
Apr4g0782 681 ProSiteProfiles Leucine-rich repeat profile. 250 272 IPR001611 GO:0005515
Apr4g0782 681 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 2 676 - -
Apr4g0782 681 Gene3D Phosphorylase Kinase; domain 1 359 477 - -
Apr4g0782 681 SUPERFAMILY L domain-like 63 310 - -
Apr4g0782 681 PRINTS Leucine-rich repeat signature 227 240 - -
Apr4g0782 681 PRINTS Leucine-rich repeat signature 248 261 - -
Apr4g0782 681 Pfam Leucine Rich Repeat 179 200 IPR001611 GO:0005515
Apr4g0782 681 SUPERFAMILY Protein kinase-like (PK-like) 385 675 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0782 Apr-Chr4 6360335 6365194 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g0782 2 571 Receptor kinase-like Gene Family AT4G08850 47.924 1.96e-175 525
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Apr4g0782 Pkinase 2.8e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0782 - - aprc:113860796 1281.93