Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0776 ATGGGGTGTGTGATTAGCAGGGAAGTGTCCAAGGGAATAATCTCTGAGGTGAAGGAAGAGAGGAGTTTGAGTGGTGAGTCTAAGAGGGAGGTGTCAGGGAGCAAAAGGGAGGGTGTAGAGGTTCAGAATGGGGGGAACCAGAAGGAGAAGGAGAAGGGTGGTGGTGGGGAAGGGGTGCAGCGGCCTCGGGCCGAAAGAAGGAGATCGAAGGCGAATCCAAGGCTGAGCAATCCGGCAAAGCATTTGCGTGGGGAGCAGGTTGCAGCTGGGTGGCCTCCCTGGCTCACTGCAGTGTGTGGGGAAGCACTCAATGGCTGGATTCCGCGAAAGGCTGACACGTTTGAGAAAATTGATAAGATTGGGCAAGGAACTTATAGTAACGTGTACAAAGCTAAAGACACGTTGACGGGTAAGATTGTTGCACTAAAAAAGGTTCGGTTTGACAATTTGGAACCTGAGAGTGTAAAATTCATGGCAAGAGAGATTCTTATTTTGCGAAGGTTGGATCATCCCAATGTTGTAAAGTTGCAAGGTTTAGTTACATCAAGGATGTCTTGTAGTTTGTATTTGGTGTTCGATTACATGGAGCATGATTTGGCTGGACTTGCTGCAAGCCCGGGAATCAGGTTCACAGAGCCTCAGGTAAAATGTTACATGCATCAGCTGCTATCAGGACTGGAGCACTGTCATAACCGTCACGTACTTCACCGTGATATTAAAGGTTCAAATCTTCTTGTTGACAATGAGGGAATACTTAAGATTGCCGACTTTGGACTGGCATCTATTTTTGATCCAAACCACAGGCATCCCATGACTAGTCGTGTAGTGACCCTTTGGTATCGGCCTCCCGAGTTGCTTCTTGGTGCCACGGATTATAGTGTGGGTGTAGATCTCTGGAGTGCTGGATGTATTTTAGGGGAGTTATTGGCTGGGAAGCCAATTATGCCTGGTCGTACTGAGGTGGAGCAACTGCACAAGATATACAAACTATGCGGTTCACCTTCTGATGAGTATTGGAAGAAGTCAAAGTTGCCTAATGCTACCTTGTTTAAACCTCGAGAGCCATACAAGAGACGCATAAGAGAGACATTTAAAGATTTTCCACCTTCTGCTCTACCACTCATTGATACTCTTCTTGCAATTGATCCTGTAGAACGAAAAACTGCCTCAGATGCTTTAAGAAGTGAGTTTTTTACCACTGAGCCTTATGCATGTGATCCTTCTAGTCTTCCAAAATATCCCCCAAGCAAGGAAATGGATGCTAAACGACGAGATGATGAAATGAGGAGACTAAGAGCTGCAGGCAAAGCTCAGGCTGATGGTCCAAAGAAGCACCGCACGCGTGATCGGGCAGTAAAAGCTTTTCCTGCTCCTGAAGCCAACGCTGAGCTTCAATCAAATATTGATAGAAGACGTCTAATCACTCATGCAAATGCTAAGAGCAAGAGTGAAAAGTTCCCTCCACCGCATCAAGATGGACAACTTGGTTTTCCTTTGGGATCTTCACATCATATTGATCCTGATACTGTTCCTACAGATGTCTCTTTCACGTCAACCTCGTATACCTATTCAAAGGAACCATTCCAAGCTTGGTCTGGTCCCATTGGTAACACTGCTGACATTGGAGTGTCAAAGCGGAAGAAACACACTACAGGCGATGCATTGGATTTATCAAGACCACTAAAAGGTGGCCTCAAGGAGAAGGCTAAAGGAAAGAAAATCATAGCTTAG 1731 0.4598 MGCVISREVSKGIISEVKEERSLSGESKREVSGSKREGVEVQNGGNQKEKEKGGGGEGVQRPRAERRRSKANPRLSNPAKHLRGEQVAAGWPPWLTAVCGEALNGWIPRKADTFEKIDKIGQGTYSNVYKAKDTLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVVKLQGLVTSRMSCSLYLVFDYMEHDLAGLAASPGIRFTEPQVKCYMHQLLSGLEHCHNRHVLHRDIKGSNLLVDNEGILKIADFGLASIFDPNHRHPMTSRVVTLWYRPPELLLGATDYSVGVDLWSAGCILGELLAGKPIMPGRTEVEQLHKIYKLCGSPSDEYWKKSKLPNATLFKPREPYKRRIRETFKDFPPSALPLIDTLLAIDPVERKTASDALRSEFFTTEPYACDPSSLPKYPPSKEMDAKRRDDEMRRLRAAGKAQADGPKKHRTRDRAVKAFPAPEANAELQSNIDRRRLITHANAKSKSEKFPPPHQDGQLGFPLGSSHHIDPDTVPTDVSFTSTSYTYSKEPFQAWSGPIGNTADIGVSKRKKHTTGDALDLSRPLKGGLKEKAKGKKIIA* 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0776 576 Gene3D Transferase(Phosphotransferase) domain 1 197 437 - -
Apr4g0776 576 Gene3D Phosphorylase Kinase; domain 1 101 196 - -
Apr4g0776 576 MobiDBLite consensus disorder prediction 536 559 - -
Apr4g0776 576 ProSitePatterns Serine/Threonine protein kinases active-site signature. 234 246 IPR008271 GO:0004672|GO:0006468
Apr4g0776 576 PANTHER CELL DIVISION PROTEIN KINASE 48 553 - -
Apr4g0776 576 MobiDBLite consensus disorder prediction 15 83 - -
Apr4g0776 576 CDD STKc_CDK9_like 114 398 - -
Apr4g0776 576 ProSitePatterns Protein kinases ATP-binding region signature. 120 143 IPR017441 GO:0005524
Apr4g0776 576 PANTHER OS01G0367700 PROTEIN 48 553 - -
Apr4g0776 576 MobiDBLite consensus disorder prediction 406 426 - -
Apr4g0776 576 MobiDBLite consensus disorder prediction 542 559 - -
Apr4g0776 576 Pfam Protein kinase domain 114 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr4g0776 576 SMART serkin_6 114 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr4g0776 576 MobiDBLite consensus disorder prediction 15 72 - -
Apr4g0776 576 SUPERFAMILY Protein kinase-like (PK-like) 108 405 IPR011009 -
Apr4g0776 576 ProSiteProfiles Protein kinase domain profile. 114 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0776 Apr-Chr4 6305164 6310837 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g0776 106 438 Core Cell Cycle Gene Families AT5G10270 52.436 8.69e-123 369
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Apr4g0776 Pkinase 2.3e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0776 K08819 - gmx:100786837 1051.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0776 4 6305164 6310837 Apr8g1487 8 23802675 23811750 ECH
Apr4g0776 4 6305164 6310837 Apr4g0776 4 6305164 6310837 ECH
Apr4g0776 4 6305164 6310837 Apr8g1487 8 23802675 23811750 PCT