Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0773 ATGTACGATAGCAGTTTTTCTGAATTGGGAGTGCGAAGAAGGAATCGAAATCGAAATCGAAATCGGATGGGTGCTCCGAAGAAAAGCGGCGCTAGGGTTTCAGTTTCAGAGGACCCCGACGAACTGGTGCGGGTTCCCTTGCAGGCCATTCTCTTGGCTGATAGTTTTACCACCAAGTTCAGACCTATCACGCTCGAACGCCCCAAAGTGCTGTTGCCGCTGGTGAATGTTCCGATGATAAATTACACCTTGACCTGGCTCGAATCTGCTGGCGTCGAAGAGGTTTTTGTTTTCTGCTGTTCTCATTCCAAACAGGTCATTAACTATTTGGAGAAATCTGAGTGGTTCTCTCAACCAAATTTTACGGTATCAACTATTGAGTCACAGAATTCCGTGAGCGCCGGAGATGCTCTTCGCGTAATATACGAACGTAATGTGGTGTCTAGTCGTATACATGGAGACTTTATCCTTATCAGTGGAGATACTGTAAGCAATATGTCGCTTACTCAGGCACTTCTAGAGCATAAAGAAAGGAGGAAAAAAGATAGTAATGCTGTGATGACTATGGTCATTAAACGGTCGAAACCTAATCCAGCTATCCATCAGTCTCGGCTTGGAACTGATGAACTTTTCATGGCAATTGATCCTAATACCAAGCAACTTTTATATTATGAGGATAGGGCAGACCATTCAAAAGGAATTCTACATCTTGATAAGTCATTGCTTGCTGATAATCCTTCCCTCTCTCTGCACCATGACAAGCAGGATTGCTACATTGACATCTGCTCACCAGAAGTCCTTAGCCTATTTACAGACAATTTTGACTACCAACATCTAAGGCGTCATTTTGTCAAGGGATTGCTTCTTGATGATATAATGGGATACAAAATTTTTGTTCATGAAATCCACTCAGACTATGCTGCAAGGGTTGATAATTTCCGAAGCTACGACACTGTCAGCAAGGATATAATTCATAGATGGACGTATCCATTGGTGCCAGATGTAATGAATTTTGGCAACACAGCTACTAAACTTGAACGACAAGGAATGTATCGTGCTTCAGAAATATCAAAATCACAATCTGCTGTTATTGGCCCTTTCACTCTCATAGGATCAGGCACCAAAATTGGGAATAACTCTAAAATTTCAAATTCTGTTATTGGAGAAGGATGTAAAATTGGGTCAAACGTTATCATAGAGGGATGCTATATATGGGACAACATCACCATAGAAGATGGCTGTAAGCTCCAGCATGCAATTGTATGTGATGGGGTGACTATAAAGTCAGGTGCTATTCTGGAACCAGGTGCTATTTTGTCTTTCAAGGTTGTAGTTGGGCCAGAGTTTCTTGTTCCTCAATATTCAAAAGTATCTCTCTTACCGCAGCCAATCGAAGAAGATAGTGATGAGGAGCTTGAATACGCAGATAGTACCAGTGGTAATACTGAATTTTTGAATTTATTGTTTCTCATTACACTTTATTTTATTGATCAGCTAGGTGTTGGCAGTGTTGGTCATGTTTGGTCACCATGTGAAGGAGGCCATGAAGAAGAGTGGAGGCATTCAGTGGCACGTATTCCTGCTGATAAAATTCTGGAGGCAATGCAATCTATGGAAGATGAACTGGAGTTGAATCACGATGGCAGTTTACTTCCCCCTTCTGGTGAGCTGAAACCTAATTCTAATGATTCAGATGATGATGATCATGACGATTCTAGAGATGACTCTTATTACTTTGAGAAAGAGGTTGAAGCAACTTTTCTCAGGGCTGTGCATGAAAACATACAAGAAAGCCATTTGATATTAGAAGTTAACTCTCTGAAGTTGTCATACAATAAGCTAACTGCTGATTGTGCTGGAGCTGTATTTTATGCCATGATGAAGCATGCTTTAGACAGACCCCATAGTTCATCTGATGGCTTGCTTCAAAATGTTCAGGCTGTATTTACAAAATGGAAAAAGGTTCTTACATCCTATCTAACTGACATAGACGAGCAGATTGAAGTAATACTTAAATTTGAAGAGATGTGTTTGGAATCTGCTAAGGATTTTGCTCCATTGTTCACAAAGATATTGCACTACTTCTATAATGAAGATATTGTAGAAGAAGATGCGATTTTGAGCTGGGAAGATGAGAAAAAAGAAGCCGATGAAACAGATAAAGTTTTTGTTAAGCAGGCCGAAAGATTAATTCAATGGTTAAAAGAGGCATCGGAAGAAGAAGATGATGACTAG 2235 0.4036 MYDSSFSELGVRRRNRNRNRNRMGAPKKSGARVSVSEDPDELVRVPLQAILLADSFTTKFRPITLERPKVLLPLVNVPMINYTLTWLESAGVEEVFVFCCSHSKQVINYLEKSEWFSQPNFTVSTIESQNSVSAGDALRVIYERNVVSSRIHGDFILISGDTVSNMSLTQALLEHKERRKKDSNAVMTMVIKRSKPNPAIHQSRLGTDELFMAIDPNTKQLLYYEDRADHSKGILHLDKSLLADNPSLSLHHDKQDCYIDICSPEVLSLFTDNFDYQHLRRHFVKGLLLDDIMGYKIFVHEIHSDYAARVDNFRSYDTVSKDIIHRWTYPLVPDVMNFGNTATKLERQGMYRASEISKSQSAVIGPFTLIGSGTKIGNNSKISNSVIGEGCKIGSNVIIEGCYIWDNITIEDGCKLQHAIVCDGVTIKSGAILEPGAILSFKVVVGPEFLVPQYSKVSLLPQPIEEDSDEELEYADSTSGNTEFLNLLFLITLYFIDQLGVGSVGHVWSPCEGGHEEEWRHSVARIPADKILEAMQSMEDELELNHDGSLLPPSGELKPNSNDSDDDDHDDSRDDSYYFEKEVEATFLRAVHENIQESHLILEVNSLKLSYNKLTADCAGAVFYAMMKHALDRPHSSSDGLLQNVQAVFTKWKKVLTSYLTDIDEQIEVILKFEEMCLESAKDFAPLFTKILHYFYNEDIVEEDAILSWEDEKKEADETDKVFVKQAERLIQWLKEASEEEDDD* 745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0773 744 MobiDBLite consensus disorder prediction 1 35 - -
Apr4g0773 744 Pfam Nucleotidyl transferase 49 193 IPR005835 GO:0009058|GO:0016779
Apr4g0773 744 Pfam Bacterial transferase hexapeptide (six repeats) 368 401 IPR001451 -
Apr4g0773 744 SUPERFAMILY Nucleotide-diphospho-sugar transferases 45 397 IPR029044 -
Apr4g0773 744 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 39 331 IPR029044 -
Apr4g0773 744 SUPERFAMILY ARM repeat 579 737 IPR016024 -
Apr4g0773 744 ProSiteProfiles W2 domain profile. 573 744 IPR003307 GO:0005515
Apr4g0773 744 MobiDBLite consensus disorder prediction 542 574 - -
Apr4g0773 744 CDD eIF-2B_epsilon_N 47 267 IPR035543 -
Apr4g0773 744 Gene3D Hexapeptide repeat proteins 347 475 - -
Apr4g0773 744 CDD W2_eIF2B_epsilon 579 742 IPR044123 GO:0005085|GO:0031369
Apr4g0773 744 CDD LbH_eIF2B_epsilon 369 447 - -
Apr4g0773 744 Gene3D - 566 744 - -
Apr4g0773 744 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT EPSILON 35 744 - -
Apr4g0773 744 SUPERFAMILY Trimeric LpxA-like enzymes 294 454 IPR011004 -
Apr4g0773 744 Pfam eIF4-gamma/eIF5/eIF2-epsilon 665 744 IPR003307 GO:0005515
Apr4g0773 744 SMART 542_3 653 740 IPR003307 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g0773 23 738 Eukaryotic Initiation Factors Gene Family AT2G34970 63.459 0.0 942
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0773 K03240 - gmx:100788809 1237.63