Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0764 ATGTTCACCATGGAGTGCAACAAGGATGAGGCTCTGAGGGCTAAGCAGATTGCTGAAAATAAAATGCAAGCTGGTGATTTTCAAGGGGCACTGAAGTTTGCTATGAAGGCAGAAAAACTGTTTCCTGAGATTCAGAACATAGTTCAGATCCTTGCAGTTTGTGAGGTTCACTGTGCTGCACAGAACAAATTCTCTGGGTCTGACATGGACTGGTATGGAATTCTTCAGGCTCAACGATTTGCTGATGAAGCAACTATAAAGAAACAGTATAGGAAGCTTGCGCTGCTACTTCATCCTGATAAAAATAAATCTGCTGGTGCAGAAGCTGCTTTCAAGTTGATTGGAGAAGCTAACAGAGTGTTGGGTGACCAAACAAGGCGTACTTTGTATGACTCGAGGTTTAGAGTTCATGTGGGATTTACAGCACCAAAGGTTCCACCCTGTCACCCAAATGGGAATTCTTTTGGGACAAAATGTGATGGAAATGGAAGAAATTATCAGAACAATTTTTTTTCACACTCCCATGCTTGGAATTCCCATCAGCGGGTTGAACATCAGACATTTTGGACATCTTGCCCACATTGTAATACTAGATATCAATACTACAAAACCATTTTAAATACTGCCTTGTGCTGTCAACAATGTTCTAAAACCTTTACAGCTCATGATGTGGGGCAGTATGGTGTGCCTCCAGGATATCAGGCATCATTTAATAGCCAGAAAGATCATTCCAAACATGCTCCACCAAAAGATGCATCAAAAAACACTGGTGGAAAATTCTCTGGTAGAGGACAGGATGATAAGTTTAAGAAGTATTGTCCTGTATCTATGACAAAATGTTCTGCTGGAGGTGGTGTCTCTTCTAAAGTTGAAAAGAACAAAGATGGCCATGTGGCTTCAGGAGTGACAAAGGCTGGTGCTGGAACGTCCAACCCTGCTACTTCGAAAGCCAAGGAATCACAAACCTCTACAAGTGTTGGAAGTAAGAGAGCAAGGCAGTCAACTTCAGATTTGAGAGATGATAAAAAGGATGGAAGTAGTAAGGACATGAAAGATACCAATGTTCAAGAAAATGGTGCTGATCCTTTTGGATTTAATGCAGGAGATCACCTCAGGAGATCTTCCAGGAAAAAACACCATGTTTCGTTCACAGAAACTACTCAAGATGGTGATTCTGGGGGTCCTTTCAAAAGGCCACGACAACATGAGTTATTTACCTCTGCTGAAGTGGAGAAAAGACAAGTGCCTGCAAGTGGTGTGTCGTTCAGTAACAATAGACCAGCTATTTTTACTGCTGGTGTGGGCAGTCAGAATGAAGAGATGAGAAATAAAGCAAGTTCACCACCTGAAGATACATCTTTAAGGAATAAAACCAAAGTTGAGGAAACAAATGTGCAAAGAAAGGAGGCATCCAACTCAGATCTTAATAATAGAAAGTCAAAGGCTGAGAATTGTTCTTCAGTGAAGTCAAATTTACCTCCCAATTTAGAGATTTGCTGTCCTGATCCAGATTTCAATGATTTTGAGAAGGATAAGGAAGAGGATTGTTTTGCTATTAATCAATTATGGGCGATTTTTGATAATACTGATGGTATGCCAAGATTCTATGCTTTGGTCAAGAAAGTATTCTCCCCTTTCAAGTTACAGATTATTTGGCTGGAACCTGACTCCGATGTCCAAGATGAGATTGACTGGCATGAAGCTGGCTTGCCGGTTGCTTGTGGTAAGTTCAAACTTGGTCATTCTCAGAGAACTACAGATCGTTTTATGTTCTCTCATCAGATGCACTGCATAAAAGAAATTAGCACGGGTACTTATCTGGTATATCCAAAGAAGGGAGAAACTTGGGCGATTTTTAGACATTGGGACATTAAATGGAGTTCTAATCCAAAAGAGCATTCAGAGTATCAATTTCAATATGTGGAAGTTCTTTCTGATTTTGATGAGAATGTTGGCATTAAAGTTGCTTATCTTGGCAAACTGAAAGGGTTTGTTAGTCTCTTTCAGAAAACTATGGAGAACAAAATTAGCATATTTTGTGTTCCACCTAATGAGCTATATAGATTCTCACATCAGATTCCTTCATATAAGATGACAGGTGATGAAAGGAAAGGTGTTCCAAGAGGATCTTTTGAACTTGACCCTGCTGCTCTGCCTATTAGTTTTTTTGAAATTGGTGATCCTGGTCTTGTGAAGATGGAGGATGGAATGTTAAACAATGGAGTCAATTGTTCACACCGTGAATATTCTAAGGGTAAAGTTGAACAGGCAACGTCTAACGACAGCATTCACAAAGCACAGTCGCAAGAGAGTAGTGATGCCAAAAAAGTTTCCCCAATCCTCAGAAGATCACCAAGGTCAAACCACAAAAGTATGGACAATGGTCAAGCAAGCAATGGTCAATATACAGTCAGAAAGGATGAAAAAAACATTGGCTGCAGCGACTACAATCAACCAGAGGGAACCACTGCTTCTCAGACTAATAAGAAGGTCAAGACACCTCAGAAACTTTTTGAGAAAAATAATTATGAAAGAGAGGCACTGAAAGTTAGGAAGTCACCTAGAGATTTAAGCAAGAAAAATGCTCAAGGAGATGCCGTTGAACAGACAACAGGCAAGTTGACTGATAATCATTCAAATGACAGCAAACATGTTAAGGACTGGAATATTCCTCAGTCAGTAGGAAGTGTTCCTGCTTGTTTCAAAGAAGATTGCAGAGTTGCGGGAGCATCCTGTTATGACTTTAAGAAGAAAAAATCTGAAGAGCTGTTTCACTGTGGTCAGATATGGGCAATATATGGCGATAGGGATAATATGCCCGATACGTATGCTCAAATTAAGAAGATTGAATTTTCCCCTAATTTTAAATTGCAGGTGTCCGTGCTTGAACCCTGCTCACCACCCAAAGACTTGAAAAGAACAATATCTTGTGGTACCTTCAAAGTTAAGAAAGCCAAATCACGGATTCTATATCTCTCTGCATTCTCTCATAAATTAAATGTTGAACCCATCGCAAATAATAGATTTGAAATTTACCCAAGAAAAGGTGAGATTTGGGCTCTGTACAAGGACCAGAACTATGATGTGACATCAAATCAGGGCAGAGGTGGATGCCATATAGTAGAAGTATTAGCAGATAGTGATAAGACTATACAAGTTGTTATTCTGATGCCGCTTAGCAGCTCTCTTCCAATTTTCAAGGCTCCTAGAATTCAGAGATCTAAAACTGCTGTAATTGAAATATTAAGAGAAGAGGTTGATAGATTTTCACATCAGATTCCTGCTTTTCAGCACAGTGGGGAAGACAATGTTCATTTCAGAGGGTGTTGGGAGCTTGATCCTTCTTCCGTACCTGGTTTTTTCGTACAAATAGACTGA 3378 0.3991 MFTMECNKDEALRAKQIAENKMQAGDFQGALKFAMKAEKLFPEIQNIVQILAVCEVHCAAQNKFSGSDMDWYGILQAQRFADEATIKKQYRKLALLLHPDKNKSAGAEAAFKLIGEANRVLGDQTRRTLYDSRFRVHVGFTAPKVPPCHPNGNSFGTKCDGNGRNYQNNFFSHSHAWNSHQRVEHQTFWTSCPHCNTRYQYYKTILNTALCCQQCSKTFTAHDVGQYGVPPGYQASFNSQKDHSKHAPPKDASKNTGGKFSGRGQDDKFKKYCPVSMTKCSAGGGVSSKVEKNKDGHVASGVTKAGAGTSNPATSKAKESQTSTSVGSKRARQSTSDLRDDKKDGSSKDMKDTNVQENGADPFGFNAGDHLRRSSRKKHHVSFTETTQDGDSGGPFKRPRQHELFTSAEVEKRQVPASGVSFSNNRPAIFTAGVGSQNEEMRNKASSPPEDTSLRNKTKVEETNVQRKEASNSDLNNRKSKAENCSSVKSNLPPNLEICCPDPDFNDFEKDKEEDCFAINQLWAIFDNTDGMPRFYALVKKVFSPFKLQIIWLEPDSDVQDEIDWHEAGLPVACGKFKLGHSQRTTDRFMFSHQMHCIKEISTGTYLVYPKKGETWAIFRHWDIKWSSNPKEHSEYQFQYVEVLSDFDENVGIKVAYLGKLKGFVSLFQKTMENKISIFCVPPNELYRFSHQIPSYKMTGDERKGVPRGSFELDPAALPISFFEIGDPGLVKMEDGMLNNGVNCSHREYSKGKVEQATSNDSIHKAQSQESSDAKKVSPILRRSPRSNHKSMDNGQASNGQYTVRKDEKNIGCSDYNQPEGTTASQTNKKVKTPQKLFEKNNYEREALKVRKSPRDLSKKNAQGDAVEQTTGKLTDNHSNDSKHVKDWNIPQSVGSVPACFKEDCRVAGASCYDFKKKKSEELFHCGQIWAIYGDRDNMPDTYAQIKKIEFSPNFKLQVSVLEPCSPPKDLKRTISCGTFKVKKAKSRILYLSAFSHKLNVEPIANNRFEIYPRKGEIWALYKDQNYDVTSNQGRGGCHIVEVLADSDKTIQVVILMPLSSSLPIFKAPRIQRSKTAVIEILREEVDRFSHQIPAFQHSGEDNVHFRGCWELDPSSVPGFFVQID* 1126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0764 1125 MobiDBLite consensus disorder prediction 750 888 - -
Apr4g0764 1125 ProSiteProfiles dnaJ domain profile. 70 134 IPR001623 -
Apr4g0764 1125 MobiDBLite consensus disorder prediction 790 805 - -
Apr4g0764 1125 Gene3D DnaJ domain 56 140 IPR036869 -
Apr4g0764 1125 MobiDBLite consensus disorder prediction 395 409 - -
Apr4g0764 1125 MobiDBLite consensus disorder prediction 833 862 - -
Apr4g0764 1125 SUPERFAMILY Chaperone J-domain 66 135 IPR036869 -
Apr4g0764 1125 SMART dnaj_3 69 126 IPR001623 -
Apr4g0764 1125 PANTHER - 787 1119 - -
Apr4g0764 1125 PANTHER - 4 730 - -
Apr4g0764 1125 Pfam DnaJ domain 70 131 IPR001623 -
Apr4g0764 1125 PANTHER DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN 787 1119 - -
Apr4g0764 1125 PANTHER DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN 4 730 - -
Apr4g0764 1125 MobiDBLite consensus disorder prediction 299 488 - -
Apr4g0764 1125 Pfam Domain of unknown function (DUF3444) 497 702 IPR024593 -
Apr4g0764 1125 Pfam Domain of unknown function (DUF3444) 907 1101 IPR024593 -
Apr4g0764 1125 MobiDBLite consensus disorder prediction 333 355 - -
Apr4g0764 1125 CDD DnaJ 70 123 IPR001623 -
Apr4g0764 1125 MobiDBLite consensus disorder prediction 417 453 - -
Apr4g0764 1125 PRINTS DnaJ domain signature 72 90 IPR001623 -
Apr4g0764 1125 PRINTS DnaJ domain signature 90 105 IPR001623 -
Apr4g0764 1125 PRINTS DnaJ domain signature 106 126 IPR001623 -
Apr4g0764 1125 MobiDBLite consensus disorder prediction 454 476 - -
Apr4g0764 1125 MobiDBLite consensus disorder prediction 232 263 - -
Apr4g0764 1125 MobiDBLite consensus disorder prediction 304 332 - -
Apr4g0764 1125 MobiDBLite consensus disorder prediction 815 832 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0764 Apr-Chr4 6220812 6225704 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g0764 7 231 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 30.736 3.87e-25 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0764 - - aprc:113861153 2293.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0764 4 6220812 6225704 Apr4g0764 4 6220812 6225704 ECH
Apr4g0764 4 6220812 6225704 Apr8g1481 8 23731938 23734840 PCT