Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0757 ATGACTCGTGTCATGCAGGACAGTGAAGAAAAAAGTCCTGCAAACGGATCAAGGATGGTCCCAGTGGACAAAGCTTTTAATGACAAACGCAAAAAGCGAGGCATTAATGCATTTTCTTGCCCTTCTTCTACACAAGACTCGAGACAATTTGATATGGGGGAAAAGGAAGAAGTTGTCTCAACTCTAAGAGAAGTCTTACGCATTACAGGCATTGACTCTCATCAACCACCTGAACTGGCTCCTACTTGTCCAAGCTTCGGGACACGATTTCAATGGAGCAAGTCTTTTAAACTATTGAAAAAAATATCATTTAAGCACCTACCCTCTTCTTCTTGCTTCCCAAACGCAATGAAATCTAAAAGCAAAAGCACTGGAGAATATCCTGTTCTATGTAATTCAGACAAAACCGGATCTTTCGTGAATTTCAGCCTCTCTGACCTGAAAAATGCAACCAACAATTTCAGCAATGAAAACTTAATTGGAAGAGGTGGTCAAGCTGTGGTTTACAAGGGTCGCCTCCAAGATGGGCAACTAATAGCGGTTAAGCGACTGGTTAAAGGGAGTGAAGATGAGAGGACATCAAGCTTTCTATCTGAGGTAGGGATTATGGCTCATGTTGACCATCCTAATACTGCCAAGCTCATTGGATGTGGAATTGAGGAAGAAATGCACCTTGTCTTCCAATTATCTCCACTCGGAAATTTAGGATCTCTTCTTCATGGTTCAAATAAAATTAAATTAGATTGGAGTATAAGGCATAAAATTATCATGGGAATAGCTAATGGCCTCCTCTATCTTCATGAGAATTGTCAAAGGCGAATCATTCACAGAGACATTAAACCAGATAATATTTTGCTTGCCGAGAATTTTGAACCACAGATTTGTGATTTTGGACTTGCGAAGTGGTTACCAGAACAATGTAGTAGTCACTATGTATCCAAATTTGAAGGCACATTCGGGTATTTTGCTCCTGAATATTTGATGCATGGCATAGTAAACGAGAAAACTGATGTTTACTCCTTTGGGATTCTACTTTTGGAGATCATAACTGGGCACCAAGCTTTGGATCATATGCAACAAAGTATTGTGTTATGGGCAAAACCTTTGTTTGATGCTAACCAGATTAAGGACCTTATTGATCCTTCTCTTGGTGATGAATATGACCGAGAACAAGTGCATCGTGCTGTTTTGACTGCATCTTTATGTGTTGAGCAATCTCCTATCTTACGCCCCAGCATGAGTCAGGTTGCAATATTGCTAAGAGGCGATGACGCTGCGCATGAAATTGTTGAAGAATGTCCAAGTCCCTCTCTCCAAAGAACATGCTCGGAGGAGTTACAGGATATAGTACGATAA 1356 0.4056 MTRVMQDSEEKSPANGSRMVPVDKAFNDKRKKRGINAFSCPSSTQDSRQFDMGEKEEVVSTLREVLRITGIDSHQPPELAPTCPSFGTRFQWSKSFKLLKKISFKHLPSSSCFPNAMKSKSKSTGEYPVLCNSDKTGSFVNFSLSDLKNATNNFSNENLIGRGGQAVVYKGRLQDGQLIAVKRLVKGSEDERTSSFLSEVGIMAHVDHPNTAKLIGCGIEEEMHLVFQLSPLGNLGSLLHGSNKIKLDWSIRHKIIMGIANGLLYLHENCQRRIIHRDIKPDNILLAENFEPQICDFGLAKWLPEQCSSHYVSKFEGTFGYFAPEYLMHGIVNEKTDVYSFGILLLEIITGHQALDHMQQSIVLWAKPLFDANQIKDLIDPSLGDEYDREQVHRAVLTASLCVEQSPILRPSMSQVAILLRGDDAAHEIVEECPSPSLQRTCSEELQDIVR* 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0757 451 Pfam Protein kinase domain 155 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr4g0757 451 ProSiteProfiles Protein kinase domain profile. 154 430 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr4g0757 451 Gene3D Phosphorylase Kinase; domain 1 130 228 - -
Apr4g0757 451 ProSitePatterns Serine/Threonine protein kinases active-site signature. 274 286 IPR008271 GO:0004672|GO:0006468
Apr4g0757 451 MobiDBLite consensus disorder prediction 1 26 - -
Apr4g0757 451 SUPERFAMILY Protein kinase-like (PK-like) 137 427 IPR011009 -
Apr4g0757 451 Gene3D Transferase(Phosphotransferase) domain 1 231 434 - -
Apr4g0757 451 PANTHER OS08G0249100 PROTEIN 68 445 - -
Apr4g0757 451 PANTHER RECEPTOR-LIKE CYTOSOLIC SERINE/THREONINE-KINASE 68 445 - -
Apr4g0757 451 SMART serkin_6 154 430 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0757 Apr-Chr4 6173486 6176626 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g0757 142 440 Receptor kinase-like Gene Family AT1G53420 42.532 3.48e-71 240
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Apr4g0757 Pkinase 1.3e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0757 - - gmx:113001177 570.081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0757 4 6173486 6176626 Apr8g1475 8 23639163 23641701 ECH
Apr8g0191 8 1542698 1546185 Apr4g0757 4 6173486 6176626 ECH
Apr4g1111 4 9396713 9399875 Apr4g0757 4 6173486 6176626 ECH
Apr1g1693 1 26611910 26615660 Apr4g0757 4 6173486 6176626 ECH
Apr4g0757 4 6173486 6176626 Apr4g0757 4 6173486 6176626 ECH
Apr4g0757 4 6173486 6176626 Apr8g1475 8 23639163 23641701 PCT