Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0727 ATGATTGAGATGCTCACACAAAAATTTAATCAATTTGTTATTCACTGTAATTTGAAGCCCTCCTCAGATAATGCACCAGCGCAATTCAATAACGAGACCCCTGAACCTGACAACAATGATGAGAATAGTATTTCCAATAGAATCCATGAAAGTTCTCCTGATCAGGGTCATACACTCCCAATATTGAAAAAGGTTCTTGACTTGAGTACCCAAGTTCAGAATTTGAAGAAACAACACGTAGCCCTATCTGATCAAGTAAAACTCACTATAGAGTCATTTCCAGGCCTGGATGTTTTGAAGTCTGTTCAGCTACTTGGTGCTGAATACGAAGTCTTGAAGAGAAAGTACCTGGAGGAGTCCTTTGAGCGTAGGCGGCTTTACAATGAAGTGATTGAACTGAAGGGAAATATCAGAGTTTTCTGCAGATGCAGACCATTAAATCAAAATGAAATAGCCAATGGATCAGCAGTGTCTGTGGTCAATTTTGAGTCTTCTCCTGATGAGCTCCAAGTCATTAGCTCTGATTCTTCTAAAAAGCAATTTAAATTTGATTATGTATTCAGACCTGAAGATAACCAAGAGGCTGTTTTTACACAAACAAAACCTATCGTTACGTCCGTATTGGATGGGTACAATGTTTGCATTTTTGCATATGGTCAAACTGGAACTGGCAAGACTTTTACGATGGAGGGAACACCAGAGCACAGGGGAGTTAACTATAGAACCCTGGAGGAATTATTTCATATATCTGAGGAGAGACGTGGCATAATAAAATATGAATTACTTGTTAGCATGTTGGAGGTTTACAATGAGAAGATAAGAGATCTCTTGGTGGAAAATTCAGTTGAGTTTACTAAGAAGTTGGAGATAAAGCAATCTGCAGATGGAACCCAAGAAGTCCCAGGACTTGTTGAAGCTCGTGTTTATGGAACAAAGGATGTGTGGGAAATGCTGAAATCTGGAAACCGAGTCAGATCTGTTGGATCCACCAATGCTAATGAGCTTAGCAGTCGTTCTCATTGTTTGTTGCGAGTGACTGTTTTGGGGGAAAACGTAATCAATGGCCAGAAAACAAGGAGTCACCTTTGGCTAGTAGACTTAGCTGGCAGTGAGCGTGTGGGGAAAACCGAAGCCGAAGGAGAAAGACTGAAGGAATCTCAATTCATAAACAAGTCTCTATCAGCACTTGGTGATGTAATATCAGCCCTTGCATCCAAATCAGCCCACATACCTTACAGGAACTCGAAGCTCACCCATATACTCCAGAGCTCTTTAGGAGGTGATTGCAAAACTTTAATGTTTGTCCAGATAAGTCCAGGTGCAGCAGACTTAACAGAGACACTTTGTTCTTTGAATTTTGCCACACGTGTGCGAGGAATTGAGAGTGGCCCAGCCCGCAAGCAAGCAGACCTCACTGAACTGTATAAGTACAAGCAAATGGCAGAAAAGCTCAAACACGATGAGAAGGAAACTAAAAAATTACAAGATAACTTGCAGACAGTGCAGATGAGACTTGCTACCAGAGAACTCATGTGCCGAAATCTTCAAGAGAAGGTTCGGGACCTTGAGAACCAGATAGCCGAGGAGAGAAAAATTAGACTGAAGCAAGAAAGTAGATCGCTTGCTGCTGTTTCAGCTCAACCTTCAACAATGTCATCGTTAAATCACACAGCAGTTCAGAAAGCCACAAAGAAGCCACCACTGGATCCTTCAATAAGACCCCCACTAAGAAGAATTACTAATTTCTTGCCTCCCCCACCTGAGAGAAGGCCCTCACGTTGCTCTTCTGTAGATGGAAAAGAAAACATTGCCAGAACAACCTCGATGACTACAAATACACAAGTTGGCCTTATGAAACCAAGAAGAAGGGTATCCATTGCTGCAAGGCCCCCACCTGCACCATCAACAACACAGGTCTTTCAGCCTAGAAGGCGAGTTTCCATGGCTACACTCCATCCTGACTCAACATCTGGCATGTCAACAACTCCACTTCACAGCTCCTCTCAATTCACTTGTGCAAGCAGTGTTCAGCAATCACTGATAAGGAACCAAAGGAAAGCTCGATATTCAAGGTTGTTTGCTCCATTGCCAGAAATTAGAACTTCAGTTGAGACAACACCAACGTTGATGAGGAGCAGCAGTAAGTTTGCAGGCAGTCCAACACAGGTCGCTTCGCGGATGGCAGCTAAGCATCCAACTGTCCTTGCACTGCAACGAAAATCTTTAGTGTGGAGTCCTCTCAAGCAGAGAGGCTTGAAAAATAGTAGCAGAAAGTCATCAATCTTGCAGGCTTGA 2295 0.4279 MIEMLTQKFNQFVIHCNLKPSSDNAPAQFNNETPEPDNNDENSISNRIHESSPDQGHTLPILKKVLDLSTQVQNLKKQHVALSDQVKLTIESFPGLDVLKSVQLLGAEYEVLKRKYLEESFERRRLYNEVIELKGNIRVFCRCRPLNQNEIANGSAVSVVNFESSPDELQVISSDSSKKQFKFDYVFRPEDNQEAVFTQTKPIVTSVLDGYNVCIFAYGQTGTGKTFTMEGTPEHRGVNYRTLEELFHISEERRGIIKYELLVSMLEVYNEKIRDLLVENSVEFTKKLEIKQSADGTQEVPGLVEARVYGTKDVWEMLKSGNRVRSVGSTNANELSSRSHCLLRVTVLGENVINGQKTRSHLWLVDLAGSERVGKTEAEGERLKESQFINKSLSALGDVISALASKSAHIPYRNSKLTHILQSSLGGDCKTLMFVQISPGAADLTETLCSLNFATRVRGIESGPARKQADLTELYKYKQMAEKLKHDEKETKKLQDNLQTVQMRLATRELMCRNLQEKVRDLENQIAEERKIRLKQESRSLAAVSAQPSTMSSLNHTAVQKATKKPPLDPSIRPPLRRITNFLPPPPERRPSRCSSVDGKENIARTTSMTTNTQVGLMKPRRRVSIAARPPPAPSTTQVFQPRRRVSMATLHPDSTSGMSTTPLHSSSQFTCASSVQQSLIRNQRKARYSRLFAPLPEIRTSVETTPTLMRSSSKFAGSPTQVASRMAAKHPTVLALQRKSLVWSPLKQRGLKNSSRKSSILQA* 765
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0727 764 Coils Coil 65 85 - -
Apr4g0727 764 ProSitePatterns Kinesin motor domain signature. 360 371 IPR019821 GO:0003777|GO:0005524|GO:0007018
Apr4g0727 764 CDD KISc_C_terminal 134 461 - -
Apr4g0727 764 SMART kinesin_4 134 468 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr4g0727 764 MobiDBLite consensus disorder prediction 23 53 - -
Apr4g0727 764 MobiDBLite consensus disorder prediction 545 600 - -
Apr4g0727 764 PANTHER KINESIN-LIKE PROTEIN KIN-14S 74 761 - -
Apr4g0727 764 Pfam Kinesin motor domain 142 460 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr4g0727 764 PRINTS Kinesin heavy chain signature 210 231 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr4g0727 764 PRINTS Kinesin heavy chain signature 330 347 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr4g0727 764 PRINTS Kinesin heavy chain signature 361 379 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr4g0727 764 PRINTS Kinesin heavy chain signature 410 431 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr4g0727 764 Coils Coil 477 539 - -
Apr4g0727 764 Gene3D Kinesin motor domain 131 503 IPR036961 -
Apr4g0727 764 MobiDBLite consensus disorder prediction 23 56 - -
Apr4g0727 764 MobiDBLite consensus disorder prediction 568 591 - -
Apr4g0727 764 PANTHER KINESIN-RELATED 74 761 IPR027640 GO:0003777|GO:0007018
Apr4g0727 764 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 136 496 IPR027417 -
Apr4g0727 764 ProSiteProfiles Kinesin motor domain profile. 136 460 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr4g0727 764 MobiDBLite consensus disorder prediction 545 560 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0727 Apr-Chr4 5960322 5964669 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g0727 102 466 Calmodulin-binding Proteins AT5G65930 43.052 1.16e-78 273
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0727 K10406 - gmx:100788477 1061.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0727 4 5960322 5964669 Apr4g0727 4 5960322 5964669 ECH