Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0710 ATGATTTTCATCGTTACCATATTGATGTTCCTATCATTGCAAAGAACCCACATTTTGACTGTGCATGCAGTGTTGAATGCAGCAGAAACCTTCCATGTCCACGACCCTTCAAAGATCTATTTCACCGAGGAGAATCATCAAGAAAATGAAAACCAGATTAAGAAAATGTCAGGAATAGAAGAGAGTGAAAACAAGCAAACTTTCATGGTGGAAAAGTTTAGAACTTTGCTTGGACTCAACAGATTCCACTCAAGAGGACCAAGTTATGACAACTCCGACTTTGTTTCCCCATCACATTCTCCTCCACCCAACCCAGAACCTAAGGCTCTAGCTCCAGCCCTGCATGTTCTCCTTCATTCCCACCCTCCAAGATATGACTCTCACAAGAAACAGCGACTTAACAAGGTTCAACATGGAGATAGAGCTAGAGTTAAAAGAACACTAGTGGCTGTTTTAGTATCTGGTGGAGTTGCCACGTTAATTTGTGCACTTGGGTGTTTCTGGGTCTGCGGAAAATTCAGAAATCAGAAAAAGAAACCCAAGAGGACAATTCCACTCTTTAGCAAGAAAGGAAGAACTAGAGGTACTTACCAAAATTCATCAAGAAATGTGAGTTTGAGCTATGAAAATATTTTTAGTTTGAAACAAACTTGTGAGAGATCACAAAGTAGCATTTCAAGTCATAGCTCCCCAACATGTACAATTTATGAGAAGGAGATAGAGTCATGCCAAGAACAAGAAGTAATTAATCCAGAATATGAAAATGCTAGTAGTTCTTCCACAAAGGAAATTCTCTCTGTTCACGAGGATTTGGAGTCCGTGAAATACGAATATAATGGATGCAACTCTTGCTTTGGAGATTCAGATAACGAAAGTTTTCATTCATGTGTTGATTCACATTCACCAATTCTCGTATTTTCTAATGCTTCATCTGGTAGTCTAAATGAAATATTGTCCCTCTCCCCAAGAAATTCAATTTTGTCATCGACTTCAAAGGTAAAATCTAGCCAATCACCATTCAGTCCCAAACAGGAAGGGCCAAGAAAGATTGAAACTTATTTTCAGTGTCCACAATCCTCTACTTACCCTCCACCATCTCCACCACCTCCACCTTTACCACTACCTCAACAACTGGGTAAGGATGGAAACACCCTCCCAAAACTCAAACCCCTTCACTGGGACAAAGTAAGAGCTAACCCAGATCGAATCATGGTTTGGGATAAGCTACAAACAAGCTCATTTGAGTTGGATGAGGAAATGATGGAGGCACTTTTTGGTTACAATCTACAAAATTCAATGAAAAACGATGAAACAAAGAGCAAAAGCCCATCACCAATGAAGCACGTACTTGAGCCAAAACGGCTACAGAACATAACAATACTCTCCAAAGCTCTGAGTATGACAGCTGAGCAAGTTTGCGAAGCCCTAATACAAGGGAAGGGTTTGTCTTTGCAACAACTAGAGGCACTGCTGAAAATGGTACCCACGAAGGAAGAAGAGGCTAAGCTCTTAACTTATAAAGACGTCAATGAACTGGGGTCAGCCGAAAAATTTGTGAGAGCAATGCTAAGCATACCATTTTCCTTTCAACGAGTGGAAGCCATGCTTTACGAAGAGACTTTCGAAGATGAAATTGTTCACCTCAATAACTCTTTTTCAGCGATAGAGGAAGCGTGCAAGGAACTAAGGTCAAGCAAGCTCTTCTTGACATTACTGGAAGCAGTGCTCAAAACGGGAAACCGTATGAACGTTGGTACAATAAGGGGAGGTGCCAGAGCATTCAAGCTCGATGCCCTTCTCAAGCTTTCTGATGTTAAAGGAACCGATGGTAAAACCACATTGCTCCATTTCTTTGTTCAGGAGATTGTTCGGTCAGAAGGAATTAGAGCTTCATCAGATCATAGCATTAAAGGGAAGAAAAGTGAAAACAGAACAAAAGAAGAAGAATATAAAAGAATAGGACTTGAACTTGTTTCTGGTCTAAGCACTGAATTAAGTAACGTTAAGAAAACAGCTACCATTGACTTAGATGTTCTTTCAAGATCTGTCTCAAACCTATCCGATGGAATGGCTAACATGCAAAAGCTGGTGAAGGGGCAGTTGCATGAGGATAAAAAATGTGAGAGCTTTGTAAATTCTATGAAGTGTTTTCTGAATTATGCAGTAAAAAAGGTGCACGAATTGCAAGGAGAGAAAGATAGAGTCCTGACACGCGTGAAGGAAATAAATGAGTATTTTCATGGGGATGTGAGTAACGAAGACCCAAATCCACTTGGAATCTTCATGATCGTGAAGGACTTTCTAGACATGCTAGATAATGTGTGTAATGAGCTTAGAAGCTCCACATTGTTTCAAACGCAGCGAGGTATAGGAATCGAATCAATCGATTTCAATGGCGAAGAGCAAAATAACGGCGGCTTTGCTTCTGTTTGGGTTCGTGCTACTAGTGGAGATACCCACTTGGGAGGAGAGGACTTTGACCACAGCCTCATGGACTATTTCATCCAATTGATAGAGAAACAACTGATACGAGATGCCTTTGATGGGAAAGAACTGAGCAGGGGTATCAACCCTGATGAGGCTGTTGCAATTGGTGCTGCTATTCAAGGTGGAATACTCAGCAGTGAAAGAGGGGAAGAAACCAAAAGTACTAACCCAATCTAA 2664 0.4088 MIFIVTILMFLSLQRTHILTVHAVLNAAETFHVHDPSKIYFTEENHQENENQIKKMSGIEESENKQTFMVEKFRTLLGLNRFHSRGPSYDNSDFVSPSHSPPPNPEPKALAPALHVLLHSHPPRYDSHKKQRLNKVQHGDRARVKRTLVAVLVSGGVATLICALGCFWVCGKFRNQKKKPKRTIPLFSKKGRTRGTYQNSSRNVSLSYENIFSLKQTCERSQSSISSHSSPTCTIYEKEIESCQEQEVINPEYENASSSSTKEILSVHEDLESVKYEYNGCNSCFGDSDNESFHSCVDSHSPILVFSNASSGSLNEILSLSPRNSILSSTSKVKSSQSPFSPKQEGPRKIETYFQCPQSSTYPPPSPPPPPLPLPQQLGKDGNTLPKLKPLHWDKVRANPDRIMVWDKLQTSSFELDEEMMEALFGYNLQNSMKNDETKSKSPSPMKHVLEPKRLQNITILSKALSMTAEQVCEALIQGKGLSLQQLEALLKMVPTKEEEAKLLTYKDVNELGSAEKFVRAMLSIPFSFQRVEAMLYEETFEDEIVHLNNSFSAIEEACKELRSSKLFLTLLEAVLKTGNRMNVGTIRGGARAFKLDALLKLSDVKGTDGKTTLLHFFVQEIVRSEGIRASSDHSIKGKKSENRTKEEEYKRIGLELVSGLSTELSNVKKTATIDLDVLSRSVSNLSDGMANMQKLVKGQLHEDKKCESFVNSMKCFLNYAVKKVHELQGEKDRVLTRVKEINEYFHGDVSNEDPNPLGIFMIVKDFLDMLDNVCNELRSSTLFQTQRGIGIESIDFNGEEQNNGGFASVWVRATSGDTHLGGEDFDHSLMDYFIQLIEKQLIRDAFDGKELSRGINPDEAVAIGAAIQGGILSSERGEETKSTNPI* 888
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0710 887 Pfam Formin Homology 2 Domain 381 771 IPR015425 -
Apr4g0710 887 ProSiteProfiles Formin homology-2 (FH2) domain profile. 378 797 IPR015425 -
Apr4g0710 887 SUPERFAMILY Formin homology 2 domain (FH2 domain) 363 779 - -
Apr4g0710 887 SMART it6_source 378 786 IPR015425 -
Apr4g0710 887 Gene3D Formin, FH2 domain 380 782 IPR042201 -
Apr4g0710 887 PANTHER FORMIN-RELATED 3 780 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Apr4g0710 887 Gene3D - 843 856 - -
Apr4g0710 887 Gene3D - 810 821 - -
Apr4g0710 887 MobiDBLite consensus disorder prediction 355 388 - -
Apr4g0710 887 Gene3D - 857 871 - -
Apr4g0710 887 Gene3D Actin; Chain A, domain 4 822 841 - -
Apr4g0710 887 Pfam Hsp70 protein 840 876 IPR013126 GO:0005524|GO:0140662
Apr4g0710 887 MobiDBLite consensus disorder prediction 360 376 - -
Apr4g0710 887 PANTHER FORMIN-LIKE PROTEIN 3 780 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0710 Apr-Chr4 5813295 5817386 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g0710 368 779 FH2 protein (formin) Gene Family AT3G05470 68.235 0.0 573
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0710 - - aprc:113861122 1681.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0710 4 5813295 5817386 Apr8g1387 8 21265935 21269490 PCT