Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0695 ATGATGATGATGACAATGGAGGGGATGATGGACAAGGGAGTGCTTGATGATGTGATCAGAAGATTGCTTGAAGGGAAGGGAGGAAAACAGGTTCAGCTCTCTGAGTCTGAGATCCGTCAACTCTGCGTCAACGCTCGACAAATCTTCCTCTCTCAACCAATTCTTCTTGACCTTCGTGCTCCCATCCGCATCTGCGGTGATATACATGGTCAGTACCAAGACTTATTGAGGCTTTTTGAATATGGTGGATACCCTCCTGCGGCAAATTACTTGTTTCTGGGGGATTATGTGGATAGAGGGAAGCAAAGTTTGGAGACTATATGTTTGCTTTTGGCCTACAAGATAAGATATCCGGATAAAATTTATCTGTTGAGGGGAAATCATGAAGATGCAAAGATAAACAGGATATATGGTTTTTATGATGAATGTAAAAGGAGGTTCAATGTTAGGCTATGGAAGATATTCACAGATTGCTTTAATTGTTTGCCGGTAGCTGCACTCATTGATGAGAAAATACTTTGTATGCATGGGGGACTCTCTCCAGAGCTACAAAATTTAGGTCAGATAAGGGAGATTCAAAGGCCTACTGAAATTCCGGATAGTGGTCTCCTTTGTGATCTGCTGTGGTCTGATCCTGATGCTAGCATTGAGGGCTGGGCAGATAGCGACCGAGGCGTTTCGTGTACTTTTGGACCTGATGCACTTGCAGAGTTTTTGGATAAAAATGACCTTGATCTTGTCTGCAGAGGGCATCAGGTTGTGGAGGATGGATATGAGTTTTTCGCTAAAAGAAGATTAGTCACAATATTTTCTGCTCCAAATTATGGTGGGGAATTTGACAACGCCGGTGCATTGTTGAGTGTTGACGAATCTCTTGTATGTTCCTTTGAGATATTGAAACCCGTTGATAGAGGATCAGGAAGTGGTACATCAAAAATGAATTTAAAGAAGCCCCCTAAACTTGGAAAGGTCTAG 975 0.4256 MMMMTMEGMMDKGVLDDVIRRLLEGKGGKQVQLSESEIRQLCVNARQIFLSQPILLDLRAPIRICGDIHGQYQDLLRLFEYGGYPPAANYLFLGDYVDRGKQSLETICLLLAYKIRYPDKIYLLRGNHEDAKINRIYGFYDECKRRFNVRLWKIFTDCFNCLPVAALIDEKILCMHGGLSPELQNLGQIREIQRPTEIPDSGLLCDLLWSDPDASIEGWADSDRGVSCTFGPDALAEFLDKNDLDLVCRGHQVVEDGYEFFAKRRLVTIFSAPNYGGEFDNAGALLSVDESLVCSFEILKPVDRGSGSGTSKMNLKKPPKLGKV* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0695 324 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE PP1 ISOZYME 8 2 312 - -
Apr4g0695 324 SMART pp2a_7 33 303 IPR006186 GO:0016787
Apr4g0695 324 Gene3D - 8 307 IPR029052 -
Apr4g0695 324 PRINTS Serine/threonine phosphatase family signature 61 88 IPR006186 GO:0016787
Apr4g0695 324 PRINTS Serine/threonine phosphatase family signature 90 117 IPR006186 GO:0016787
Apr4g0695 324 PRINTS Serine/threonine phosphatase family signature 123 147 IPR006186 GO:0016787
Apr4g0695 324 PRINTS Serine/threonine phosphatase family signature 157 183 IPR006186 GO:0016787
Apr4g0695 324 PRINTS Serine/threonine phosphatase family signature 186 213 IPR006186 GO:0016787
Apr4g0695 324 PRINTS Serine/threonine phosphatase family signature 243 263 IPR006186 GO:0016787
Apr4g0695 324 PRINTS Serine/threonine phosphatase family signature 265 281 IPR006186 GO:0016787
Apr4g0695 324 ProSitePatterns Serine/threonine specific protein phosphatases signature. 124 129 IPR006186 GO:0016787
Apr4g0695 324 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2 312 - -
Apr4g0695 324 SUPERFAMILY Metallo-dependent phosphatases 16 303 IPR029052 -
Apr4g0695 324 Pfam Serine-threonine protein phosphatase N-terminal domain 15 59 IPR031675 -
Apr4g0695 324 CDD MPP_PP1_PPKL 14 301 - -
Apr4g0695 324 Pfam Calcineurin-like phosphoesterase 62 253 IPR004843 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0695 Apr-Chr4 5678600 5681558 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g0695 56 249 Calmodulin-binding Proteins AT5G63870 31.878 3.01e-31 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0695 K06269 - gmx:100805030 638.647
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0695 4 5678600 5681558 Apr4g0695 4 5678600 5681558 ECH