Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0681 ATGGGGCATTTATCCTCTATGTTCAATGGGTTGCTGGCAAAGTCTTTTTCAAAAAAGAAAGTAAGAAAATCTGGGAGATGTGAAGGGAGGGAAGCTGCTGAAGCAATGGCAAAGGAAGCCAAGAAAAATGACATGATGTTGTGTAGTACGGGCACTGTTAATGTTGATGGTTCAAATAACTTTGCCTCCGTTTTCTCCAAAAGAGGTCAGAAAGGAGTGAACCAAGATTGCTGCATAGTATGGGAGGAATTTGGGTGCCAAGAGGACATGATTTTCTGTGGGATCTTTGATGGGCACGGGCCATGGGGTCACTTTGTGGCCAAAAGAGTAAGAGAGTCAATGCCACCATCTTTGCTATGTAACTGGCAAGAGACACTTGCCCAAACTTCACTTGATGCTGATATTGATACCGAGGAAGAGAAAAGGCGACAATATCAATTTAACATATGGAAGCATTCTTACTTGAAGACTTGTGCTTCCGTTGATCAAGAGCTAGAACAGTATCGCAAGATAGACTCGTTTTACAGCGGAACAACTGCCCTTTCAATTGTTAGACAGGGTGAACTCATTGTCATAGCAAATGTTGGTGACTCTCGTGCTGTATTAGCTACAACATCAGAAGATGGAAGTTTGGTCCCAGTTCAGCTAACAGTGGATTTCAAGCCCAATTTACCTCAGGAGGCAGAGAGAATAACTCAGTGCCAGGGGCGCGTTTTCTGCTTGGAGGACGAGCCAGGGGTGCACAGGGTGTGGTTACCTGATGAAGAATCTCCAGGACTAGCCATGTCAAGGGCTTTTGGTGATTACTGCATTAAAGAGTATGGTCTTATTTCCGTGCCTGAGGTGACACAAAGGAACATAAGCATTAGGGACCAGTTTGTTGTGGTAGCCACTGATGGGGTTTGGGATGTGATCTCTAATCAAGAAGCAGTAGATATTGTGTCTTCAACTACTGATAAAGCAAAATCAGCTAAGTGTCTGGTGGAATGTGCGGTGCATGCATGGAAACGCAAGAGAAGGGGCATTGCCATGGATGACATTTCAGCTATTTGCCTCTTCTTACACTCTCCCCTTTCACCAGCGCAAGTTAGCCACGTTGCAACCTTCAAATAG 1113 0.4474 MGHLSSMFNGLLAKSFSKKKVRKSGRCEGREAAEAMAKEAKKNDMMLCSTGTVNVDGSNNFASVFSKRGQKGVNQDCCIVWEEFGCQEDMIFCGIFDGHGPWGHFVAKRVRESMPPSLLCNWQETLAQTSLDADIDTEEEKRRQYQFNIWKHSYLKTCASVDQELEQYRKIDSFYSGTTALSIVRQGELIVIANVGDSRAVLATTSEDGSLVPVQLTVDFKPNLPQEAERITQCQGRVFCLEDEPGVHRVWLPDEESPGLAMSRAFGDYCIKEYGLISVPEVTQRNISIRDQFVVVATDGVWDVISNQEAVDIVSSTTDKAKSAKCLVECAVHAWKRKRRGIAMDDISAICLFLHSPLSPAQVSHVATFK* 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0681 370 PANTHER ALPHABET, ISOFORM E-RELATED 1 357 - -
Apr4g0681 370 Pfam Protein phosphatase 2C 78 324 IPR001932 -
Apr4g0681 370 PANTHER CATALYTIC/PROTEIN PHOSPHATASE TYPE 2C 1 357 - -
Apr4g0681 370 SUPERFAMILY PP2C-like 54 355 IPR036457 -
Apr4g0681 370 SMART PP2C_4 52 352 IPR001932 -
Apr4g0681 370 CDD PP2Cc 60 354 IPR001932 -
Apr4g0681 370 ProSiteProfiles PPM-type phosphatase domain profile. 61 354 IPR001932 -
Apr4g0681 370 Gene3D - 50 356 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0681 Apr-Chr4 5601831 5605340 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g0681 1 355 PP2C-type Phosphatase Gene Family AT3G05640 72.549 0.0 541
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0681 - - gmx:100808955 662.914
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0681 4 5601831 5605340 Apr4g0681 4 5601831 5605340 ECH
Apr4g0681 4 5601831 5605340 Apr8g1366 8 20894859 20898423 PCT