Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0678 ATGAGTAGGACTGAATTATCGAGGACAAAGTCACCGCCGGTACCATTGGCGACTCTGATTGGCCGTGAGCTTCGAAATGGAAAAGTTGAAAAACCTTTTGTGAAGTATGGACAAGCTGGATTGGCAAAGAAAGGAGAAGATTACTTTCTGATCAAGACAGATTGCCTCAGGGTTCCTGGGGATGCATCGACGGCGTTTTCTGTCTTTGCGATCTTTGATGGGCATAATGGCATATCAGCTGCTATTTTTGCGAAGGAAAACTTGCTAAGTAATGTTTTGAGCGCAATACCTCAAGATATCAGCAGGGATACTTGGCTTCAGGCCCTTCCTCGTGCTCTCGTTGTTGGTTTTGTAAAGACTGACATAGAGTTTCAGCAAAAGGGGGAAACTTCTGGAACAACAGCTACATTTGTCCTTGTTGATGGATGGACTATCACTGTTGCATCTGTTGGGGATTCCCGTTGCATATTAGATACTCAGGGAGGCGTAGTTTCTCTCTTGACAGTTGATCACAGACTGGAAGAGAATGCGGAAGAGAGGGAGCGTGTTACTGCCAGTGGTGGTGAAGTAGGAAGACTCAATGTATTTGGTGGCAACGAGGTTGGGCCTCTTCGCTGCTGGCCTGGTGGATTGTGCCTATCTAGATCAATAGGTGACACAGATGTGGGAGAATTTATTGTGCCAATACCACATGTTAAGCAAGTGAAGCTTTCAAATGCTGGTGGAAGGCTTATTATAGCTTCTGATGGTATTTGGGATGCTTTATCTTCTGATATGGCTGCCAAGTCATGTCGGGGTCTACCGGCCGAGCTTGCTGCAAAACTAGTGGTAAAGGAAGCTCTGAGGTCAAGAGGCCTCAAGGATGATACAACCTGCCTTGTTGTAGATATTATTCCTTCGGATCTCCCTGTATTACCACCAACTCCAAGAAAGAAACAAAATATGCTAACTTCACTTCTATTTGGAAAGAAATCCGAGAACTCTACAAACAAAACTACTAACAAGCTTTCTGCAGTTGGTGTTGTGGAGGAGTTATTTGAAGAGGGTTCCGCAATGCTTACGGAAAGGCTGGGTAAAGATTTTCCATTAAATAAGAATTCTGGGATTTTCCGCTGTGCCGTTTGCCAAGTGGATCAACCCCCTGGCGATGGTTTATCAGTGAATTCTGGGCCCTTTTTCTCTCCAGCATCTAAGCCATGGGAAGGTCCATTCCTCTGCACGAACTGTCGGAAGAAGAAAGATGCTATGGAAGGAAAAAGGCCTAGCAGGCCCACCATTACAGCATAG 1287 0.4538 MSRTELSRTKSPPVPLATLIGRELRNGKVEKPFVKYGQAGLAKKGEDYFLIKTDCLRVPGDASTAFSVFAIFDGHNGISAAIFAKENLLSNVLSAIPQDISRDTWLQALPRALVVGFVKTDIEFQQKGETSGTTATFVLVDGWTITVASVGDSRCILDTQGGVVSLLTVDHRLEENAEERERVTASGGEVGRLNVFGGNEVGPLRCWPGGLCLSRSIGDTDVGEFIVPIPHVKQVKLSNAGGRLIIASDGIWDALSSDMAAKSCRGLPAELAAKLVVKEALRSRGLKDDTTCLVVDIIPSDLPVLPPTPRKKQNMLTSLLFGKKSENSTNKTTNKLSAVGVVEELFEEGSAMLTERLGKDFPLNKNSGIFRCAVCQVDQPPGDGLSVNSGPFFSPASKPWEGPFLCTNCRKKKDAMEGKRPSRPTITA* 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0678 428 CDD PP2Cc 43 297 IPR001932 -
Apr4g0678 428 Gene3D - 33 301 IPR036457 -
Apr4g0678 428 PANTHER PROTEIN PHOSPHATASE 2C 5-RELATED 2 427 - -
Apr4g0678 428 ProSiteProfiles PPM-type phosphatase domain profile. 25 297 IPR001932 -
Apr4g0678 428 SMART PP2C_4 23 295 IPR001932 -
Apr4g0678 428 Pfam Protein phosphatase 2C 63 280 IPR001932 -
Apr4g0678 428 SUPERFAMILY PP2C-like 38 297 IPR036457 -
Apr4g0678 428 PANTHER ALPHABET, ISOFORM E-RELATED 2 427 - -
Apr4g0678 428 SMART PP2C_SIG_2 50 297 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0678 Apr-Chr4 5572685 5575929 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g0678 1 427 PP2C-type Phosphatase Gene Family AT1G09160 78.454 0.0 673
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0678 - - gmx:100807886 817.764