Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0677 ATGACAACCGAACAATTTGTACCATTCTCTGTTGTTTCTGTGGTCGAAGATGTTCTTCAACAACATGGTGGCCGTTTAGACGTCAACTTGGCGTCAAGAAAAGCTGAAGAAGCTTCCTTGAGAAGATATGAAGCAGCTGGTTGGCTGCGAAAGACAGTTGGAGTTGTTGGAGGGAAAGACTTGCCAGCTGAGCCTTCTGAAGAAGACTTCAGGATTGGATTGCGTAGTGGGATTATCCTCTGCAATGTTCTTAACAAAATTCAACCTGGAGCAGTGCCCAAGGTAGTTGAAGGTTCATGCGATTCTGTTATTATTCCTGACGGGGCAGCACTGTCTGCGTTTCAATATTTTGAAAATGTAAGGAATTTTCTTGTAGCTATGGAGGAAATGGGGCTTCCAACCTTTGAAGCTTCTGATTTGGAACAGGGAGGAAAATCTTCAAGGATAGTGAATTGTGTTCTAGCTCTCAAGTCCTACGCTGAAGGGAAACATGGAGGAAGACATGGGTCATGGAAAAATGGTGGGGCTGGGAATCCAAAGCCACCTACCTCCGGGAAACCAATTGCGAGGAAAAACTCTGAACCATTCATGAAGTCTTTATGGACTATGTCATCAGGGGACAGAGATGGTTATATGAGTGATCCCGGGCATGATCCAAATGAAGGGGGTTCCTTTCCTTCCTTAAAAGCACTAGTTCGTGAATATTTATTTGAGAAGAAGCCAGAAGAAATTCCCATTGTGGTAGAATCCCTCCTTAGCAAAGTCATGGAAGAATTTGAACATCGCATGCAAATCCAACAAGAAACGTGTAAAACAACTCAAGAAGATAAGGCACCATCTGAAACAGAATGTTCAATTTCCAAAGCTGCTTCAGTTGATGAAGAGACTGAAGAAAAGGAAGATGAACCGGAGGAAGTACAGGATAAAAAAGAGGAATTTTATGAAGAGAAGTACAATGGTCATGAAGAATCAAACATCCAGAGTTTGATTTTGAAGCAGCAAAAGATAGTAGAACAACAAAACAGAAGCATCCAAGAATTGAAAATCATCGTCCATCAAACAAAATCAGGAATGCAGTTTATGCAGAAGGAACACCAGAAGGAGATCATTAATTTAAGTAAGCACTTGCATAGCCTATCTTCTGCTGCTTCAGGATACCACAAAGTCCTTGAAGAAAACCGCAAGCTATATAATCAAGTGCAGGATCTGAAAGGAAACATTAGGGTGTACTGTAGAGTACGACCCTTCTTGGGTGGGCAACCAAGTCATCATAGTGCTGTGAGTAACGTGGAAGCGGGAAGTATCTCAATCATAACACCTTCCAAATATGGGAAAGAGGGGAGGAAGATATTTAATTTCAACAAAGCGTTTGGTCCTTCTGCAACACAAGGGGAAGTTTTCTCAGATACACAGCCTCTGATTCGTTCTGTTCTGGATGGTTACAATGTCTGTATATTTGCCTACGGCCAGACGGGATCAGGAAAAACGTTTACTATGTCTGGACCAGACGATCTTAATGAGGAAACCATAGGTGTCAACTACCGTGCACTGAGAGATCTTTTCCATCTCCAAGAGCAGAGGAAAGACACCATTTCTTATGAAATCTCTGTTCAGATGCTTGAGATTTACAACGAGCAAGTCAAAGATCTTCTATCCACAGATGGTTCTAACAAAAGATATCCTTTCTGTTGCTATAATTAAAAGTATTTTCCATGTCATACATTAGAAATTCGCAACAGTTCCCATAATGGCATCAACGTGCCAGATGCGAACCTTGTTCCCGTTTCATGCACGGACGATGTCATAAATTTAATGAACTTGGGACATAAGAATCGAGCCGTTGGTGCCACTGCCATGAATGATCGTAGCAGTCGCTCTCACAGCTGCCTAACAGTTCATGTTCAAGGAAGGAACCTGACATCTGGAAGTGTTATTCGTGGTAGTATGCATCTTGTTGACCTGGCAGGAAGTGAGAGAGCTGATAAAACAGAGGCCACAGGGGATAGACTTAAGGAGGCTCAACACATCAACAAGTCACTTTCTGCCTTGGGAGATGTAATTTCTTCCCTTGCATCCAAGAATGCACATGTTCCCTACAGGAACAGCAAACTTACTCAGCTGCTTCAGGATTCTCTTGGAGGGCAAGCAAAGACCCTTATGTTTGTTCATATTAGTCCCGAGCCTGATGCTCTAGGAGAAACACTTAGCACACTCAAGTTCGCGGAACGGGTCTCCACTGTTGAACTCGGTGCTGCACGAGTTAACAAAGATAATTCAGATGTGAAAGAGCTTAAAGAACAGATTGCTAGTCTGAAGGCCGCATTAGCGAGAAAGGAGGGAGAAGGAGAACACTTTCCACATTCTGTGAATAATAGCCCTGAAATACCAAAGTTGAAATCATATGCTTCCTCTCCTCCTATGCAACGTAGTTGGACACCTGGAGCCCGTAAGCTGCCAAGAGATGATTCTAGTAGCTTGGAGGGCCAGAAAAAGGCAGCGACAAAGTTGAAAAGGCGAAGCCTAGATCTCCATGACATGTATAGGAATTCACCTCCGTGGCCACATGTTGGAAATCATGGAAAGGATGAAGACAAGGAATCAGTTTCTGGGGATTGGGTTGATAAGATTTCAATGAACAGGAATGACAGTTTAACTAGTGATGACAGCCTTGTGGGACAGTGGGAAGCAGAGAGTAAACAGTTTTCTCCATTGTTAAGTCCCACTTCTCTCTCAGAGCCTTCTAAAATATCCCTTGACCACTCAGATGAATCTGATGAACATGACATGGCAACTAGTGATTCTTCAGAATCAGACTTGCATTGGCCATCACATGTACCTAAACCAACCGGCATTCCAAACGGATTAGGCTCTAAACCAAACAAACCAACCAAAACCAGACTAGCAAAGAATCCAGAAACCAGGAGTATGATCCCATCATTGATTCCTACCCCATCAAAGAAACAACCCACCTTAGCTACTCAAGCCAGAAAGCATCCAGGATCTATAGATGTGAAAAAGAGGACAGGGAGTGCCAAGTGA 3039 0.4307 MTTEQFVPFSVVSVVEDVLQQHGGRLDVNLASRKAEEASLRRYEAAGWLRKTVGVVGGKDLPAEPSEEDFRIGLRSGIILCNVLNKIQPGAVPKVVEGSCDSVIIPDGAALSAFQYFENVRNFLVAMEEMGLPTFEASDLEQGGKSSRIVNCVLALKSYAEGKHGGRHGSWKNGGAGNPKPPTSGKPIARKNSEPFMKSLWTMSSGDRDGYMSDPGHDPNEGGSFPSLKALVREYLFEKKPEEIPIVVESLLSKVMEEFEHRMQIQQETCKTTQEDKAPSETECSISKAASVDEETEEKEDEPEEVQDKKEEFYEEKYNGHEESNIQSLILKQQKIVEQQNRSIQELKIIVHQTKSGMQFMQKEHQKEIINLSKHLHSLSSAASGYHKVLEENRKLYNQVQDLKGNIRVYCRVRPFLGGQPSHHSAVSNVEAGSISIITPSKYGKEGRKIFNFNKAFGPSATQGEVFSDTQPLIRSVLDGYNVCIFAYGQTGSGKTFTMSGPDDLNEETIGVNYRALRDLFHLQEQRKDTISYEISVQMLEIYNEQVKDLLSTDGSNKRYPFCCYN*KYFPCHTLEIRNSSHNGINVPDANLVPVSCTDDVINLMNLGHKNRAVGATAMNDRSSRSHSCLTVHVQGRNLTSGSVIRGSMHLVDLAGSERADKTEATGDRLKEAQHINKSLSALGDVISSLASKNAHVPYRNSKLTQLLQDSLGGQAKTLMFVHISPEPDALGETLSTLKFAERVSTVELGAARVNKDNSDVKELKEQIASLKAALARKEGEGEHFPHSVNNSPEIPKLKSYASSPPMQRSWTPGARKLPRDDSSSLEGQKKAATKLKRRSLDLHDMYRNSPPWPHVGNHGKDEDKESVSGDWVDKISMNRNDSLTSDDSLVGQWEAESKQFSPLLSPTSLSEPSKISLDHSDESDEHDMATSDSSESDLHWPSHVPKPTGIPNGLGSKPNKPTKTRLAKNPETRSMIPSLIPTPSKKQPTLATQARKHPGSIDVKKRTGSAK* 1013
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0677 1011 Gene3D - 32 163 IPR036872 -
Apr4g0677 1011 SUPERFAMILY Calponin-homology domain, CH-domain 42 171 IPR036872 -
Apr4g0677 1011 MobiDBLite consensus disorder prediction 819 844 - -
Apr4g0677 1011 Gene3D Kinesin motor domain 401 785 IPR036961 -
Apr4g0677 1011 MobiDBLite consensus disorder prediction 295 309 - -
Apr4g0677 1011 MobiDBLite consensus disorder prediction 955 994 - -
Apr4g0677 1011 Coils Coil 386 406 - -
Apr4g0677 1011 ProSiteProfiles Kinesin motor domain profile. 406 746 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr4g0677 1011 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 406 780 IPR027417 -
Apr4g0677 1011 MobiDBLite consensus disorder prediction 274 294 - -
Apr4g0677 1011 ProSiteProfiles Calponin homology (CH) domain profile. 39 161 IPR001715 GO:0005515
Apr4g0677 1011 SMART ch_5 41 159 IPR001715 GO:0005515
Apr4g0677 1011 Pfam Kinesin motor domain 412 745 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr4g0677 1011 MobiDBLite consensus disorder prediction 778 1011 - -
Apr4g0677 1011 Coils Coil 292 312 - -
Apr4g0677 1011 Coils Coil 753 780 - -
Apr4g0677 1011 MobiDBLite consensus disorder prediction 873 914 - -
Apr4g0677 1011 Pfam Calponin homology (CH) domain 42 160 IPR001715 GO:0005515
Apr4g0677 1011 MobiDBLite consensus disorder prediction 270 309 - -
Apr4g0677 1011 MobiDBLite consensus disorder prediction 856 870 - -
Apr4g0677 1011 MobiDBLite consensus disorder prediction 163 223 - -
Apr4g0677 1011 CDD KISc_C_terminal 404 748 - -
Apr4g0677 1011 Coils Coil 256 276 - -
Apr4g0677 1011 PRINTS Kinesin heavy chain signature 696 717 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr4g0677 1011 PRINTS Kinesin heavy chain signature 647 665 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr4g0677 1011 PRINTS Kinesin heavy chain signature 616 633 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr4g0677 1011 PRINTS Kinesin heavy chain signature 480 501 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr4g0677 1011 ProSitePatterns Kinesin motor domain signature. 646 657 IPR019821 GO:0003777|GO:0005524|GO:0007018
Apr4g0677 1011 MobiDBLite consensus disorder prediction 792 809 - -
Apr4g0677 1011 MobiDBLite consensus disorder prediction 915 933 - -
Apr4g0677 1011 SMART kinesin_4 404 754 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr4g0677 1011 PANTHER KINESIN-LIKE PROTEIN KLP-3 6 996 - -
Apr4g0677 1011 PANTHER KINESIN-LIKE PROTEIN KIN-14H 6 996 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0677 Apr-Chr4 5563709 5569328 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g0677 394 746 Calmodulin-binding Proteins AT5G65930 41.076 4.18e-77 274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0677 K10406 - gmx:100799535 1560.81