Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0674 ATGGTAATCATGGATCTCAAGGACAAGGAATGGTCATCTGAGAACGACAAGTGTTGTGCTCACTGCAAAACCACCAAGACCCCACTCTGGCGAGGAGGACCAGCTGGGCCCAAGACGCTGTGCAACGCTTGTGGAATAAGGTATCGGAAGAGAAGGGCTTCTTGTTGTACGGTGGGAATGAACAGAGGAGAAGAGAGGAAGAGAGGGAGGGAAGAGAATAGGGGGAGCAGCAGCAGTTCCGATTTGAGGGAGTGTTTGAAGGTAAAGTTAGTGGCGTGGGGTGAGGAAGTTCTCTTCCACCCATCACCAAAACAGAGGTTGAAGAAGTTAGGGGAAGAGGAACAAGCAGCTGTGTGTTTGATGGCATTGTCCTCTGGCTTTGTCTTCGCTTGA 393 0.5064 MVIMDLKDKEWSSENDKCCAHCKTTKTPLWRGGPAGPKTLCNACGIRYRKRRASCCTVGMNRGEERKRGREENRGSSSSSDLRECLKVKLVAWGEEVLFHPSPKQRLKKLGEEEQAAVCLMALSSGFVFA* 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0674 130 MobiDBLite consensus disorder prediction 62 78 - -
Apr4g0674 130 PANTHER OS01G0976800 PROTEIN 8 130 - -
Apr4g0674 130 ProSitePatterns GATA-type zinc finger domain. 19 44 IPR000679 GO:0006355|GO:0043565
Apr4g0674 130 ProSiteProfiles GATA-type zinc finger domain profile. 13 49 IPR000679 GO:0006355|GO:0043565
Apr4g0674 130 SMART GATA_3 13 71 IPR000679 GO:0006355|GO:0043565
Apr4g0674 130 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 12 54 - -
Apr4g0674 130 MobiDBLite consensus disorder prediction 62 82 - -
Apr4g0674 130 Pfam GATA zinc finger 19 52 IPR000679 GO:0006355|GO:0043565
Apr4g0674 130 Gene3D - 14 82 IPR013088 GO:0006355|GO:0008270
Apr4g0674 130 CDD ZnF_GATA 19 52 IPR000679 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0674 Apr-Chr4 5544155 5545506 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g0674 10 130 C2C2-Gata Transcription Factor Family AT3G06740 50.806 5.50e-30 103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Apr4g0674 GATA 5.8e-18 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0674 - - lang:109330084 141.739