Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0670 ATGGTATCAAATAGGCGATATCCTCAGAAGCACAAAGGCAGTGGCAAAATTCCAATTAGGGAGCCAAATTTTAGCCATGGTGATACAAAACAAGCATCAATAAGTGGCCTTAGAAATGTGATAAATGCACCATGGATGAATGATCATGCTTCCTACTTTGAAAATTTTTTGCGAAGAGTGGTGAGAGAGGAGGTGGAACATAAAATCCAGGGTCATGTATTTTCAAGAAAAAGGGTTAATCAGACAGGCATATCTGGAGCCAAACCCTTACAATTGCGTTTTCTTAATAAGTTGCCTGATGCAATTTTTACTCGGTCTAATATACTAGCAGAGGACAAATCGCCCCTTCAAATTGTTCTTTTTGATGTTAGATCTGGGCATGTAGTGAATGATGGTCCCCTTTCCTCACTGAAGATTGAGATCTGTGTCCTGAATGGTGAGTTTGGATCTTATGGAAGTGAGGATTGGACAAAAGATGAGTTCAATGCCAATATCTTGCGGGAAAGAAATGGTAAGGAGCCACTGTTGATTGGAGAGAGGTTTATTACTCTAAAAAATGGAGTTGGTTGCATAAATAAAATTGCCTTCACTGATAACTCCAAGTGGCAAAGGAGCAGAAGGTTCAGGTTAGGAGCCAAAGTTGTGCAACCAACTTCTGAAGGAGAAAACATTCAGGAAGGTAGAAGTGAACCTTTTGTGGTCAAAGATAACAGAGGAGAGCTGTACAAGAAACACTACCCTCCATCCTTGAAAGATGAAATATGGCGTTTGAAGAAAATTGCTAAAGGGGGGAGAATCCACAAGCGGCTCTCTGAACATGGAATTCGCACTGTTAAGGATTTCTTGCGGTTGTTCATATCCAACGAAACTTCATTATATGAAAAGTTTGGCAGCATTCCAAATAAGTCATGGTTAGCAATTATTGAACATGCCAAGGCCTGTGTGATAGATGATTACAAGCTTTACGGGTATCACTCAGCAGAACCACCAATTGGCCTGCTATTCAATTCCATCTTCATCCTTGTGGGAGTGACATTCGATTGGCAAAATTATTATTCACCGGATACTCTCACCCCCATTGAAAAGCATTTGGTGGAAATAGTGAAACAAGAAGCTTACAAAAATGTTAACTATTTGAAATTGATTGATGAAACTAAGTTGAACTGCTTAAACCTAGAGGCACGACTAAAAGCAAGACAGTCTGACACACTAGATCAAGGTCTCCTACATACTAATATCTCAACTACACAAGGTCAACCGGTAAGATCGCCAGGAGGCAGTCCACCATTTAACTCTACTTCACATTGTGATAAAGGAACTCTTGATTACCAAATCTATGCTGATCAACGGCTAGACATAAGAGAAATGCCACAAAATAGTCACGTGGAATATGAATTTCCCTCTGAAATGTACATTGAAGGGGATAGTTGTTACCTTAATGGATCACATTTTCCATTTGTGGAAGGTGGTGATGAAATAGATAATGTAAGTTCAGGTATTCAATTCATAAATGATTGTCCTCCTTACACAACATGTGAACCAGAAACTGGCTTTTTCTTTGGTTCTTCTGTCGGAGCAGAATTTAGTAGCTATTCTACTTTCCTCAATTCTGCTGTGGATATATCAAGCAATGGCAAACCTAAAGCAGTGTGGTACAAGTTTCGTGTTGCTCTCAAATGGGTCATGTCAGTGAAAAGAGATGCAGCTGCCAGAAAGAATGCCAAGCTATTTTACTATAACTGTTAG 1746 0.3958 MVSNRRYPQKHKGSGKIPIREPNFSHGDTKQASISGLRNVINAPWMNDHASYFENFLRRVVREEVEHKIQGHVFSRKRVNQTGISGAKPLQLRFLNKLPDAIFTRSNILAEDKSPLQIVLFDVRSGHVVNDGPLSSLKIEICVLNGEFGSYGSEDWTKDEFNANILRERNGKEPLLIGERFITLKNGVGCINKIAFTDNSKWQRSRRFRLGAKVVQPTSEGENIQEGRSEPFVVKDNRGELYKKHYPPSLKDEIWRLKKIAKGGRIHKRLSEHGIRTVKDFLRLFISNETSLYEKFGSIPNKSWLAIIEHAKACVIDDYKLYGYHSAEPPIGLLFNSIFILVGVTFDWQNYYSPDTLTPIEKHLVEIVKQEAYKNVNYLKLIDETKLNCLNLEARLKARQSDTLDQGLLHTNISTTQGQPVRSPGGSPPFNSTSHCDKGTLDYQIYADQRLDIREMPQNSHVEYEFPSEMYIEGDSCYLNGSHFPFVEGGDEIDNVSSGIQFINDCPPYTTCEPETGFFFGSSVGAEFSSYSTFLNSAVDISSNGKPKAVWYKFRVALKWVMSVKRDAAARKNAKLFYYNC* 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0670 581 MobiDBLite consensus disorder prediction 1 30 - -
Apr4g0670 581 Pfam Calmodulin binding protein-like N-terminal domain 90 237 IPR046831 -
Apr4g0670 581 PANTHER OS02G0177800 PROTEIN 1 577 IPR012416 GO:0005516
Apr4g0670 581 PANTHER CALMODULIN-BINDING PROTEIN 1 577 - -
Apr4g0670 581 Pfam Calmodulin binding protein central domain 249 314 IPR046830 -
Apr4g0670 581 Pfam Calmodulin binding protein C-terminal domain 320 379 IPR046829 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0670 Apr-Chr4 5518452 5522163 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g0670 51 572 Calmodulin-binding Proteins AT4G25800 33.393 3.65e-89 285
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0670 - - gmx:100816427 828.935