Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0669 ATGGAGATGGAGAAAAGACGTTCCAAGGGAAGCTTCCTCAGCTTGTTTGATTGGAACTCCAAATCTCGAAAGAAGCTGCTTTGGAACAATCCTACCGTACATGAGGTTTCAAAGCAAGGGAAGGAAAATGTGGAGAACTTACCAAAGTCGCAGCTCAGTAGGATAAAGGTGGATGAAATTGGAGCAAGTCCAAGTAACATTGGATGTTGTGAGTTTGATAGCAACCTCTCTATTTGTAGTGATGAAGGATGTGGGAGTAAAGCTCCTGGGTTAGTAGCGAGACTAATGGGTTTGGATTCATTGCCAGCTTCAGCAGTCAATGAGCTCTCGTGCAATTCTTTATATAGCTCTAACTCTCACGGAGCTTCTCATTGTAATGAAAGTGCTCTGCATTCAGTGGATGACTTTCACGCTGCCGACTACATAAACATGCCACATAAGATGGAGAAATCTTCTTTGGATGCCAAGGAATCAAGGGCACGTAAAGTGGAAAACCTTCCAATAAAGAGATTTCAAACTGAAATGTTGCCTCCAAAGTCAGCTAAACCCATTCCTGTTACTCACAATAAACTGTTATCTCCTATCAAGAGTCCTGGTTTTCTGCCACCAAAGAACGCAGCTCAGGTAATGGAGGCAGCTGCTAAGATAATTGAGGCAAGCCCTCGGCCATATATGAGGAAAAGAATGGCATCCGCCGGGCCTTCATCAGTTCCTTTGAGAATTCTTGATTTGAAAGAGAGATTGGAAGCTGCACAATGTGCATCCGTGCCTGAAAAGCCTGTGCATTTGGGAAATGCCAATCCTGCAAATGGAAAGCTTAGTGAGAGGAGCAATAATCTGTATAAATGCACTTCAGCATTCAAGGGTTCAAGAGATTCAGAAAAAATTAGTTCTTACCCTTTAGCAAGTAAAGGAAAATCAGTTTCACTCACTATACAAGCCAAAACCAATGTTCAAAGCCGAGATACATTGGTTTTAAATGGTGATAGGAAATATGTGAAGCAGAAAGAGAAGAATGATGTAAAGTCAAATCAGCTCTCAAGGAGCCAGAAACCAAGTGCTCATCGTGCCATGCAGCAGAGAACTTCCACAAGTCGAAATAGCAATGTGCTTGGGCAGAATAATCAAAAGCAAAATAGCATGACCACCAAAGGTAAATCAACTTCTAAAATAGATTTCAATCAGCCAACAACACAAGCTTCGTCTTCAGAAAGTTCTACTGGAACAAGGAAGACAAAAAACAAGGGTGCTATAAATACCAATATTCAGCCAAAAAGGTCAAGCACTAGGGCAACTGATAACCAAAAGGAGTTTCCACGATTCAAAACAGAGAGTATCTCCCAAAAGAAAAAGTATATCAGCAGAGATGTTCTTAAGGCAAGAGGTCCTGATAATGGAGTGAATAGTTTTGAAAGCAAGTCCATTAAATGCAATTTTACAACTGATGGAAGTTTTGATCAAGATGCATTTAACATGAAAGAGAGCAAGGATGTTATTTCATTTACATTTACATCTCCCTTGAGGAGAAGCATGCCTGAGTCACCATCCTCTACTGAGCAAGTGATGGGAACCAGAAATAGAATTGATGTCAACTGTCTTGGGCACAATGATAATCTTTATGCCAAAAAATTATCATTATCTCCACCAGGGTTAAATATGATAGATGGTGATGCTTTAAATGTCCTGTTGGAGAAAAAGCTTCAAGAATTGACATCTAGAATAAACTTACCTCAATGTACCCTGGCCACAGAGGGTCCTTCTACCAGTTTGAGATCTAGTTTGCAAGACAAATTTCCCAGTGTGATAAGCACCGTGCCTAAGGAACAGGAGAAGAGCTTTCACCCTGACCTGTTTAGTGATAAGCCGGATAGCATGCATAAACTTCATTTTTGTTCAAGTGATGATCCAGTGCTTAACATGAATCAGCAACTGCAGACATTAGAAGTAAGGGAAGATCCTAGCTGTAGCAGCAACGGTGAAAGTAGAAATGATCTAGTTTGCCAACTTTCCACCGCTGTCACTTTTGAAACTCCTTTGGTCAGTGAAAGTTACTTGGATAGTGAAGACAGTGCATATGGCAGCACCGTTTATTCTTCCATGCAAGATGAAGAAGTATCTAATATTTCCCAGACAAACGAATCTCCATCACTTGAAGATGAGGTGAAATGGTCAGAGCAAAGCTCTTCCACATTGATGGGCATAAATATGACCGTGAAACAAATAAGTGGAACATCAAATTTGGTAAATTATAAAAGATCAAGTGACATGGAACTTGAATATGTACAGGATGTACTTGGCAATGCAGAGTTTTTGTCGGAAGAATTTGTCACTGGTGAGACTAACATGGTCATAATGCCAAATCTCTTTCATCTGTTGGAGAATCTGAACAATGGAATAGAAAACTACGGAGAAGAGTACTCAAAGCTTGAAAGGAAGGTTATATTTGACTTTGTGAGTGAGTGGCTAGAGTTCAAATGTAAGCAAGCTTTTGTTGGAACATGCAAAGCATGGCTTGGATGGGTGACATTAGTTCAGAGGAAGAGTTGGATGGCTGAGGAATTGTACAAGGAGATGCTACGTTTTAGAAGCATGGAAGAGGTAATGGTGGATGAGCTTGTCAACAAGGACATGAGCACTGGATGCGGGAAATGGCTTGACTTTAATGTTGAAGCATTTGAAGAGGGTTTAGAAGTTGAAGGGGACATTCTAGCTTATTTGATTAATGAATTGGTTTCTGATTTGTTACATGTTTAA 2754 0.4034 MEMEKRRSKGSFLSLFDWNSKSRKKLLWNNPTVHEVSKQGKENVENLPKSQLSRIKVDEIGASPSNIGCCEFDSNLSICSDEGCGSKAPGLVARLMGLDSLPASAVNELSCNSLYSSNSHGASHCNESALHSVDDFHAADYINMPHKMEKSSLDAKESRARKVENLPIKRFQTEMLPPKSAKPIPVTHNKLLSPIKSPGFLPPKNAAQVMEAAAKIIEASPRPYMRKRMASAGPSSVPLRILDLKERLEAAQCASVPEKPVHLGNANPANGKLSERSNNLYKCTSAFKGSRDSEKISSYPLASKGKSVSLTIQAKTNVQSRDTLVLNGDRKYVKQKEKNDVKSNQLSRSQKPSAHRAMQQRTSTSRNSNVLGQNNQKQNSMTTKGKSTSKIDFNQPTTQASSSESSTGTRKTKNKGAINTNIQPKRSSTRATDNQKEFPRFKTESISQKKKYISRDVLKARGPDNGVNSFESKSIKCNFTTDGSFDQDAFNMKESKDVISFTFTSPLRRSMPESPSSTEQVMGTRNRIDVNCLGHNDNLYAKKLSLSPPGLNMIDGDALNVLLEKKLQELTSRINLPQCTLATEGPSTSLRSSLQDKFPSVISTVPKEQEKSFHPDLFSDKPDSMHKLHFCSSDDPVLNMNQQLQTLEVREDPSCSSNGESRNDLVCQLSTAVTFETPLVSESYLDSEDSAYGSTVYSSMQDEEVSNISQTNESPSLEDEVKWSEQSSSTLMGINMTVKQISGTSNLVNYKRSSDMELEYVQDVLGNAEFLSEEFVTGETNMVIMPNLFHLLENLNNGIENYGEEYSKLERKVIFDFVSEWLEFKCKQAFVGTCKAWLGWVTLVQRKSWMAEELYKEMLRFRSMEEVMVDELVNKDMSTGCGKWLDFNVEAFEEGLEVEGDILAYLINELVSDLLHV* 918
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0669 917 MobiDBLite consensus disorder prediction 327 344 - -
Apr4g0669 917 Pfam Domain of unknown function (DUF4378) 757 909 IPR025486 -
Apr4g0669 917 MobiDBLite consensus disorder prediction 327 444 - -
Apr4g0669 917 Coils Coil 792 812 - -
Apr4g0669 917 MobiDBLite consensus disorder prediction 345 429 - -
Apr4g0669 917 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 1 917 - -
Apr4g0669 917 Pfam DUF761-associated sequence motif 80 105 IPR032795 -
Apr4g0669 917 PANTHER DUF4378 DOMAIN PROTEIN 1 917 - -
Apr4g0669 917 MobiDBLite consensus disorder prediction 430 444 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0669 Apr-Chr4 5506425 5510797 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g0669 3 915 TRM (TON1 Recruiting Motif) Superfamily AT5G26910 33.514 4.82e-113 365
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0669 - - gmx:102663635 1372.45