Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0661 ATGGTTAGCCAAGAAGAGTTGTTGATTGAAAAAGTGTGCGAGCTCTATGAACAAATTTCAAGGCTTGAGAGTCTCAAACCCTGCAAAAATGTCGACATGCTTTTTACCCAACTAGTGCTCACATGCATACCCCCTAGCCCAATCGATGTCACTAATCTCAACACAACCGTGCAAGATATTAGATCCAACCTTATAAGAATCTGTGGTGAAGCTGAAGGACATTTGGAGACCCACTATTCAACCATCCTAGGCTCATACGACAACCCTCTTGATCACCTTAATATTTTTCCTTATTATACTAACTACCTTAAACTTGGTCTCCTCGAGTACACTATCCTTAGCCAACACTGCACCCATGTCCCTAGCAAAATTGCCTTTGTGGGTTCAGGACCCCTTCCTCTTACTTCAATTGTCTTGGCATCAAATCACTTACCCGCCACAATTTTTCACAACTATGACTTGGACCCTTTAGCCAATTCAAATGCTATGCGCTTGGTTTCCTGTGACCCTGACTTGTCAAAGCGCATGCTTTTTCACACCAATGATATATTGGATGTGTCCAATGCTTTGAAGGACTATGAAGTTGTTTACTTGGCAGCCCTTGTGGGCATGGACAAGGAGGGAAAGAACCGAATCATTGATCACTTGGCTAAGCACATGGCTCCAGGGGCACTTCTTATGCTAAGGAGTGCTCATGGGGCAAGGGCTTTTCTCTACCCTGTGGTTGACCCTTGTGATCTTCGAGGCTTTGAGGTCCTCTCTGTGTTCCACCCCACGGATGAGGTTATCAATTCAGTTGTCATAGCACGTAAATATCCTATGCCTATGCCTATGCCTATGCACTCACTTGAGCAAGGCCTTGGTTCTATGATCCTACCCAACAAGTGTTCTGAGATCCAAGCCTTCAACCCCCTTAACCATGGGAATATGATTGAGGAATTGACCATTGAGGAGCAACTCTTGTAA 966 0.4462 MVSQEELLIEKVCELYEQISRLESLKPCKNVDMLFTQLVLTCIPPSPIDVTNLNTTVQDIRSNLIRICGEAEGHLETHYSTILGSYDNPLDHLNIFPYYTNYLKLGLLEYTILSQHCTHVPSKIAFVGSGPLPLTSIVLASNHLPATIFHNYDLDPLANSNAMRLVSCDPDLSKRMLFHTNDILDVSNALKDYEVVYLAALVGMDKEGKNRIIDHLAKHMAPGALLMLRSAHGARAFLYPVVDPCDLRGFEVLSVFHPTDEVINSVVIARKYPMPMPMPMHSLEQGLGSMILPNKCSEIQAFNPLNHGNMIEELTIEEQLL* 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0661 321 PANTHER SYNTHASE, PUTATIVE-RELATED 1 320 - -
Apr4g0661 321 Pfam Nicotianamine synthase protein 4 273 IPR004298 GO:0030410|GO:0030418
Apr4g0661 321 ProSiteProfiles Nicotianamine synthase (NAS)-like family profile. 1 276 IPR004298 GO:0030410|GO:0030418
Apr4g0661 321 Gene3D Vaccinia Virus protein VP39 6 273 IPR029063 -
Apr4g0661 321 PANTHER NICOTIANAMINE SYNTHASE 3 1 320 IPR004298 GO:0030410|GO:0030418
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0661 Apr-Chr4 5465981 5467190 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g0661 1 318 Nicotianamine Synthase Gene Family AT5G04950 60.372 4.88e-138 392
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0661 K05953 - gmx:100803630 563.918