Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0657 ATGGCGTCTCTGCACCCAAGCATCCATTCCACTACGTCGCAAGAATCCAATCACAAGCCAGAAATCAGAGACCACAATTCCCTCAGTCTCGTTCCATGGACTTCCCAATCCCAGCAGCTGATCTATTCCTCCAATCTCGTTCGCACTCTCCGTCGGTACCGTCCTCCTCCGTCCAATCCTATTGCCGGCCGCCAAATTCGCGCCGCCGCCGACCGAGTTCTTGCTGCGACGGCCAAGGGCCGAACTCGATGGAGCCGCGCGATTCTGGCCAGTCCGCTCTGCCGGTGGAAGCTTCACTTGCAGAGTCAGCACAAAAAGGTGAAGAAGTCCGCCAACGGATTGACCAAGAAGAGGACGCCAGTGATTCAGAGAAGGTTGCCGGCGGTGCAGAAGAAAGCGCGGGTTCTCAGCCGGTTAATCCCCGGTTGCCGGAAAGTATTGTTCCAGAATCTTCTGGAAGAAGCCACTGACTATATCTCGGCCTTGGAGATGCAAGTACGAGCCATGACGGCTCTCACCGACTTCCTCTCCGGCGGTGCGCCGCCGAATGCTCGGCTCGGCTTGAGTTGA 570 0.5719 MASLHPSIHSTTSQESNHKPEIRDHNSLSLVPWTSQSQQLIYSSNLVRTLRRYRPPPSNPIAGRQIRAAADRVLAATAKGRTRWSRAILASPLCRWKLHLQSQHKKVKKSANGLTKKRTPVIQRRLPAVQKKARVLSRLIPGCRKVLFQNLLEEATDYISALEMQVRAMTALTDFLSGGAPPNARLGLS* 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0657 189 PANTHER TRANSCRIPTION FACTOR BHLH150 22 184 - -
Apr4g0657 189 CDD bHLH_AtIBH1_like 124 173 IPR044549 GO:0006355
Apr4g0657 189 MobiDBLite consensus disorder prediction 1 22 - -
Apr4g0657 189 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 22 184 IPR044660 GO:0006355
Apr4g0657 189 MobiDBLite consensus disorder prediction 1 15 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0657 Apr-Chr4 5417384 5418094 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g0657 1 169 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G09250 45.263 1.66e-37 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0657 - - gmx:100813766 209.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0657 4 5417384 5418094 Apr8g1336 8 20174192 20175175 PCT