Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0647 ATGGCCACCGGTTTACTTCCGTTATTCTTGATGGTTCTTGTGCAGTTGACCTATGCAGGGATGAACATTACCTCAAAGCTTGCAATAGAATCTGGCACCAACCCTCTTATCCTTGTTGCTTATCGACAAATCTTTGCAACTCTGTCCATTGCTCCCTTTGCTTATTGGCTGGAATGGAAAACGCTTCCCAGGATGACAAAGCGTGTTATGCTTCAGATATTATTATGTTCCTTAACAGGAGTTACAGGAAACCAGATTCTATATTTTGTGGGGCTAAAATATTCAACCGCTACAATTGCATGTGCATTGAGCAATCTGCTCCCAGCTTTTACTTTTATCCTGGCAATCATTTTCAGACAAGAGAATTTGAAAATCAAGAAGATGGATGGCCAAGCAAAGGTGATTGGGACAATTTTGTGTGTGGGTGGAGCTCTTCTCCTATCGTTTTATCATGGAAAAACTATCGGTTTAGGCAACTCAAGTATTCATTGGAGATATGCAGAGAAAATGGAAGGAACCAGCTCCTCTACCAATACAAATTTGCTTCTAGGCCCTTTAGCCTTAATTGGTAGCACACTTATTTGGGCAGGGTGGTTCATAATTCAAGCAGATTTAAGCAAGAAGTTTCCAGCTCCTTACACAAGCACCGGTTGCATGTGCTTCATGGCAAGCTTTCAATGTGTGTTCATTGCCTTGTGTTTTGACCATAGTGTCTCAGCGTGGTCACTTCGCGATGCTATGAGACTTTCCGCTGCTCTCTATGCGGGAATACTGTGCACTGGGTTAGCATATTGCCTAATGTCGTGGGCCATTGAGAGAAAAGGTCCACTTTATGTGTCTGTATTTACTCCTTTGCAGCTTGTCCTTACCGCTATTTTAAGTTGGGCTTTGCTTCAGGAGAAATTATTCGTTGGAACTGCGGTAGGGTCTCTCCTCATAATTGTGGGGCTCTATTCTGTTCTATGGGGAAAGAGCAAAGAGGTAGTAAATAAGAAAGAGGGTATTGAAGTGACAGTTAAAGAAGCAATCACAAATAATGAGAGGGATGCCAAGGTTGACCTGGAATTGCAATCCCATAAACCATCCAATTAA 1092 0.4231 MATGLLPLFLMVLVQLTYAGMNITSKLAIESGTNPLILVAYRQIFATLSIAPFAYWLEWKTLPRMTKRVMLQILLCSLTGVTGNQILYFVGLKYSTATIACALSNLLPAFTFILAIIFRQENLKIKKMDGQAKVIGTILCVGGALLLSFYHGKTIGLGNSSIHWRYAEKMEGTSSSTNTNLLLGPLALIGSTLIWAGWFIIQADLSKKFPAPYTSTGCMCFMASFQCVFIALCFDHSVSAWSLRDAMRLSAALYAGILCTGLAYCLMSWAIERKGPLYVSVFTPLQLVLTAILSWALLQEKLFVGTAVGSLLIIVGLYSVLWGKSKEVVNKKEGIEVTVKEAITNNERDAKVDLELQSHKPSN* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0647 363 SUPERFAMILY Multidrug resistance efflux transporter EmrE 226 325 - -
Apr4g0647 363 PANTHER WAT1-RELATED PROTEIN 8 339 IPR030184 GO:0016021|GO:0022857
Apr4g0647 363 SUPERFAMILY Multidrug resistance efflux transporter EmrE 41 151 - -
Apr4g0647 363 Pfam EamA-like transporter family 7 148 IPR000620 GO:0016020|GO:0016021
Apr4g0647 363 Pfam EamA-like transporter family 183 321 IPR000620 GO:0016020|GO:0016021
Apr4g0647 363 PANTHER WAT1-RELATED PROTEIN 8 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0647 Apr-Chr4 5356549 5359824 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g0647 3 361 Nodulin-like Gene Family AT1G09380 56.944 6.25e-147 418
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0647 - - gmx:100801512 563.148