Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0635 ATGGGGGCTGATCTTAATGCTGAATTATCCAAGAAAACTCCTATTTTTGGTCTCAAGGTTTGGGAAATAATTGGAATTTCAGTTGGGTTGTCTATAATAGTCATTCTTTGTGGGCTCTCACTTTGCCTTACTTCAAGGAAGAAATCTAGAAAAGCAAAGGACAAGATTCCTCTTAGTCAAATACCAATTGTCTCAAAGGAAATTAAGGAAGTGAGAGTTGAGCAAGTGTCAACAAATGGATTTGCTCCTCGGGATGGAATACTTCTTACTATTCATGATAAGTCCAGTGACAAGGAATCAGACAAAGTGATGGTTCATTTAGGTGTGGGGAAGATGAAGAATGAGGATATTAGCAGCAATAACTCAGATTCATTTCAGCATATAGAGAAAGATGGAGGCGGTTCACACTCACAGTCAGGAGAAGAAGGTAGCTCTGGCACGGTTACAGTGTTCAAGCAATCTTCTTCATACCCTATAACAGCACCTTCACCTCTCTCTGGCCTTCCAGAATTCTCTCACTTGGGTTGGGGTCATTGGTTTACCTTGAGGGATCTTGAACTTGCTACAAACCGTTTTTCCAAAGAAAATGTTCTCGGTGAAGGTGGATATGGAATTGTTTATAGGGGACAGTTGATCAATGGGACTCCAGTGGCAGTTAAAAAGATACTCAACAACATTGGTCAAGCGGAGAAAGAATTTAGAGTGGAAGTTGAAGCTATTGGCCATGTTCGACACAAAAACTTGGTTCGCCTTTTGGGGTATTGCATTGAGGGAACTCACAGGATGTTGGTTTATGAATATGTCAATAATGGAAACTTAGAACAATGGCTTCATGGAGCCATGCGTCACCATGGATACCTTACCTGGGAAGCGCGTATCAAGATTCTCCTTGGCACAGCCAAAGCGCTTGCATATTTGCATGAAGCAATTGAGCCAAAGGTGGTACACCGAGATATCAAGTCAAGCAACATATTAATTGACAATGACTTCAATGCTAAGGTTTCTGATTTTGGCCTGGCCAAGTTATTGGGTTCCGGGAAGAGTCATGTCACAACGCGAGTCATGGGAACTTTTGGATACGTGGCTCCTGAATATGCAAACACTGGCCTTCTAAATGAGAAGAGTGATGTTTATAGCTTTGGTGTTTTGCTGTTGGAAGGAATTACTGGAAGAGATCCTGTTGACTATGGTCGCCAACCAAATGAAGTGAATCTGGTTGATTGGTTGAAGATGATGGTTGGAAACAGGAGATCAGAAGAAGTGGTGGACCCCAACATTGAGATGAAGCCATCCACCAGAGCTTTAAAACGGGCCCTCTTAACTGCTTTAAGATGTGTGGATCCAGACGCAGAGAAAAGGCCCAAGATGGGCCAAGTTGTACGTATGCTGGAGTCAGAGGAATACCCTTTACCAAGAGAGGACCGAAGATACGATCGAAGAAATCGAGGGGGCAGTGCAGAAATCGAATCCCAGAGGGAATATTCTGATACAGACAGGAGTGAGATTCAGGATTCTAGAGCAGAGAGAAGAGGGTAA 1536 0.4303 MGADLNAELSKKTPIFGLKVWEIIGISVGLSIIVILCGLSLCLTSRKKSRKAKDKIPLSQIPIVSKEIKEVRVEQVSTNGFAPRDGILLTIHDKSSDKESDKVMVHLGVGKMKNEDISSNNSDSFQHIEKDGGGSHSQSGEEGSSGTVTVFKQSSSYPITAPSPLSGLPEFSHLGWGHWFTLRDLELATNRFSKENVLGEGGYGIVYRGQLINGTPVAVKKILNNIGQAEKEFRVEVEAIGHVRHKNLVRLLGYCIEGTHRMLVYEYVNNGNLEQWLHGAMRHHGYLTWEARIKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDNDFNAKVSDFGLAKLLGSGKSHVTTRVMGTFGYVAPEYANTGLLNEKSDVYSFGVLLLEGITGRDPVDYGRQPNEVNLVDWLKMMVGNRRSEEVVDPNIEMKPSTRALKRALLTALRCVDPDAEKRPKMGQVVRMLESEEYPLPREDRRYDRRNRGGSAEIESQREYSDTDRSEIQDSRAERRG* 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0635 511 ProSiteProfiles Protein kinase domain profile. 192 471 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr4g0635 511 CDD STKc_IRAK 198 464 - -
Apr4g0635 511 SUPERFAMILY Protein kinase-like (PK-like) 176 472 IPR011009 -
Apr4g0635 511 Pfam Protein kinase domain 193 460 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr4g0635 511 ProSitePatterns Protein kinases ATP-binding region signature. 198 221 IPR017441 GO:0005524
Apr4g0635 511 MobiDBLite consensus disorder prediction 463 511 - -
Apr4g0635 511 Gene3D Phosphorylase Kinase; domain 1 174 267 - -
Apr4g0635 511 PANTHER RECEPTOR-LIKE PROTEIN KINASE-RELATED 3 510 - -
Apr4g0635 511 SMART serkin_6 192 463 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr4g0635 511 PANTHER OS01G0323000 PROTEIN 3 510 - -
Apr4g0635 511 MobiDBLite consensus disorder prediction 114 148 - -
Apr4g0635 511 Gene3D Transferase(Phosphotransferase) domain 1 268 476 - -
Apr4g0635 511 ProSitePatterns Serine/Threonine protein kinases active-site signature. 314 326 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0635 Apr-Chr4 5274938 5279771 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g0635 169 466 Trihelix Transcription Factor Family AT1G70460 50.165 1.75e-90 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Apr4g0635 Pkinase 3.3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0635 - - gmx:100787014 889.412
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0635 4 5274938 5279771 Apr9g1277 9 22409775 22419753 PCT
Apr8g1316 8 19573913 19581261 Apr4g0635 4 5274938 5279771 PCT