Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0631 ATGGGCGGAGATGGAGCGACGGCGACCGCGGAGCTGCAGTACACGACGGCGAAGATATCGGTGTGGTGGGACATAGAAAACTGCCACGTGCCTAAGGGTTCGGATCCTCACGCGATCGCTCAGAACATAAGTTCCGCACTGGTTCGCATGAACTACTGTGGCCCCGTTTCCATCTCCGCCTACGGCGACACCACTCGCATCCCTGCGTCTGTGCAGCACGCGCTCTCCAGCACCGGAATCTCCCTCAACCATGTCCCTGCTGGCGTGAAAGATGCAAGCGACAAGAAGATTCTTGTTGATATGTTGTTCTGGGCAGTGGATAATCCTGCACCTGCTAATTATTTATTGATTTCCGGTGATCGAGACTTCTCTAACGCTCTCCATCAACTGAGGATGAGGAGATATAATATTCTTCTTGCACAACCACAGAAAGCATCTGCACCTCTTGTTGCAGCTGCCAAGAGCGTGTGGCTTTGGACTAGTCTTTTAGCAGGAGGACCTCCGCTATCTAATAATGGTGAATCGCAACAACTTGGTAATAGTAGCATCATGTCATCTTCTGACACCTTACAAATTCCGGTCACAAATGCCGCTCAGATACAGCAACAGGCGGATTCCTATTTGGAAGTTCATGTAGGAAATTCAAAGTTTCCAAATGGAGGAGGAAGGGGATTTGATTCTAGATATCAGGGGAAAACTACTTGGAGAAACCCGAGTCAACCTAATGGACCCAGAGCCATGAATCCACCGCCAGTTGGACTTCAAGATAATCGTAATAATATAAACTCTTATCGACCTGGCAACTTTAATCCAAATGTTCCGCTAAGTGGATCTGCTACAAATTTTGTTCGTGGCAATAATGATCAGTCATGGAGCAACAACACTAATCTCCAGGGAAATCAACAAAATCCTTATTCACAGCCATTAAGATCGAACAGTTTCCCATTGCAACCTTCTTTTGCACCTAGTAATTCGTATACTCCAAATTCCCATAATTTTGCAACTTCAACAGTGCCACCTAGGACTGGTGGTCCCAATTTCACTACTGGGCCACTTACCAATGTGCCAGATATTGGTAATCTGAACATTTCTGGATATCCTAATAGTGTTCATAACCCACGTACTGTTCCACAACGGAATGGAGAGTTGAAACATAATCCTAGTAGTAATGCTTCTTCTCTTCCTGTTAGACCAACCAATGAACAAAATGGACATATGGTACATAACAGTAGCACACAACAATCATACCAAGATTATCAACATGGTCCGGAGTATCAACCCTCACCAATGGCAGCAATGGGTAATAATAATAATCCTCCCAGTAATGGTATGTGGGGTTCTCCAGGATGTCCTAAACCTTCTGAATATGTGCAAGGCCTTATAGGGGTTGTTTTACTTGCCTTGAACTCACTAAAAAATGCAAAGATGATGCCAACCGAGGCAAATATAACTGATTGCATCCGTTATGGAGATCTCAAGCACCGCAACACTGATGTTAAGAAGGCTCTTGAGAGTGCTATTGAGCAGCAGATGGTGGTGAAACAGAATTTGGGGGCTTTGCAGTTGTATGTTGGTAAGAACGATAAACTTTGGAAGTGTGTAAATCCTTTAGGTGGTAATCCTAAGCAGCACTCAAAAGAAAGGTGGGATGAGATTCAAAAGTTTATAACAACTCCTGCAGGAAGATCAGCAATAATGGGTACACAGTGCAAGTATGAAGCAGGTATGGTGATAAAGAATATGTGTTTTAAAGATCTTGCTTTGGGTGATGTCCTTCAGATATTGAACATGTTGATTACCCATAAAAAATGGATTGTGCATCATCAATCTGGTTGGCAACCACTTAACATTACTCTTCCTGAGACAAACCCTGATTCAGGGGTTGTAGCTGGTACATAA 1899 0.4397 MGGDGATATAELQYTTAKISVWWDIENCHVPKGSDPHAIAQNISSALVRMNYCGPVSISAYGDTTRIPASVQHALSSTGISLNHVPAGVKDASDKKILVDMLFWAVDNPAPANYLLISGDRDFSNALHQLRMRRYNILLAQPQKASAPLVAAAKSVWLWTSLLAGGPPLSNNGESQQLGNSSIMSSSDTLQIPVTNAAQIQQQADSYLEVHVGNSKFPNGGGRGFDSRYQGKTTWRNPSQPNGPRAMNPPPVGLQDNRNNINSYRPGNFNPNVPLSGSATNFVRGNNDQSWSNNTNLQGNQQNPYSQPLRSNSFPLQPSFAPSNSYTPNSHNFATSTVPPRTGGPNFTTGPLTNVPDIGNLNISGYPNSVHNPRTVPQRNGELKHNPSSNASSLPVRPTNEQNGHMVHNSSTQQSYQDYQHGPEYQPSPMAAMGNNNNPPSNGMWGSPGCPKPSEYVQGLIGVVLLALNSLKNAKMMPTEANITDCIRYGDLKHRNTDVKKALESAIEQQMVVKQNLGALQLYVGKNDKLWKCVNPLGGNPKQHSKERWDEIQKFITTPAGRSAIMGTQCKYEAGMVIKNMCFKDLALGDVLQILNMLITHKKWIVHHQSGWQPLNITLPETNPDSGVVAGT* 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0631 632 CDD PIN_limkain_b1_N_like 18 142 - -
Apr4g0631 632 PANTHER LIMKAIN B LKAP 2 617 IPR024768 GO:0005777|GO:0010468|GO:1903231
Apr4g0631 632 Pfam NYN domain 18 154 IPR021139 GO:0004540
Apr4g0631 632 MobiDBLite consensus disorder prediction 212 449 - -
Apr4g0631 632 Pfam OST-HTH Associated domain 569 618 IPR025677 -
Apr4g0631 632 PANTHER ACID BINDING PROTEIN, PUTATIVE-RELATED 2 617 - -
Apr4g0631 632 Gene3D - 11 161 - -
Apr4g0631 632 MobiDBLite consensus disorder prediction 253 422 - -
Apr4g0631 632 MobiDBLite consensus disorder prediction 430 444 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0631 Apr-Chr4 5241311 5245061 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g0631 8 267 C2H2 Transcription Factor Family AT5G61190 55.556 5.90e-83 280
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0631 - - gmx:100794608 1133.63