Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0627 ATGGCTGATGGGAACACAGCTACCTGCCTCGACATCCTCCTTGCCATCATTCTCCCACCTCTTGGTGTCTTCCTTAAGTATGGTTGCAAGGTAGAGTTCTGGATCTGTTTGGTGCTTACCATTTTTGGATATATTCCTGGAATTATCTATGCTGTCTATGCTATTACCAAGTGA 174 0.4425 MADGNTATCLDILLAIILPPLGVFLKYGCKVEFWICLVLTIFGYIPGIIYAVYAITK* 58
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0627 57 ProSitePatterns Uncharacterized protein family UPF0057 signature. 13 28 IPR000612 GO:0016021
Apr4g0627 57 PANTHER HYDROPHOBIC PROTEIN RCI2 LOW TEMPERATURE AND SALT RESPONSIVE PROTEIN LTI6 -RELATED 3 57 IPR000612 GO:0016021
Apr4g0627 57 Pfam Proteolipid membrane potential modulator 9 55 IPR000612 GO:0016021
Apr4g0627 57 PANTHER BNAC03G34420D PROTEIN 3 57 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0627 Apr-Chr4 5199363 5200550 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g0627 5 57 RCI2 Gene Family AT3G05890 77.358 4.15e-26 88.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0627 - - gmx:100792684 104.76