Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0623 ATGGCTAGACTTTTGTGGGTTGGCATTGTTATAGGACTTGTTTTTAGAAACTGGGTTGATGGTTTTGTAGGATTTGAAGAACATCACTTCAATGAAACTGAACTGTCTGTGTTGGAGGCTCATGAAGCTTCTTTATCCTTGGAAGGGAGGAATCTTCTGCTGGTAGGACTCACCCTTATCCAAAATGCTGATGCTAAAGGAGCAGTGTGCTTGGATGGAACATTACCTGGTTATCATTTGCATCGGGGATATGGATCAGGAGCAAACAGCTGGCTTATTAACTTAGAGGGAGGTGGATGGTGTAATAATATCAGAACATGTGTTTATCGCAAGACAACCCGGCGTGGATCATCATCATTCATGGAAAAGAAGATACCTTTTACGGGAATATTAAGTAACAACGTTAGAGAAAACCCAGATTTTTTCAATTGGAACAGAGTAAAGCTTCGTTATTGTGATGGTGCCTCATTCGCTGGGGATGGTGAAGATAAGACTGCACAGCTGCAATTCAGAGGACAGCGTATTTGGGCAGCTGCAATGGAAGATTTGATGTCAAAGGGAATGCGTTTTGCCAATCAGGCTCTTCTCTCCGGATGTTCTGCGGGTGGCCTGGCTACTATTATACATTGTGATGAATTTAGAGGTTTCTTTCCAAGAACTACCAAAGTCAAGTGTCTAAGTGATGCTGGGTTGTTTCTTGATGCGATGGATGTATCTGGTGGGCATACCCTCAGGAATTTATACAGCGGTGTTGTAGGATTGCAGGGAGCGCAGAAGAATCTTCCACAAATTTGTACTAATCACCTTGATCCCATTTCGTGCTTCTTCCCTCAAAACTTGATTGCCAATGTTAGAACCCCATTATTCATTCTTAATGCTGCTTATGATTCATGGCAGATCCAGTCCAGTTTAGCTCCTCCATCTGCAGATCCAAATGGCTATTGGCATGATTGCAGATTAAACCATGCTAAATGTACTACATCACAAATCCAATTTCTGCAAGGATTCAGGAACCACATGCTAAATGCTATTAAAGACTTCTCAAGATCAAACAAAAATGGGTTGTTTATTAATTCCTGTTTTGCTCACTGCCAAACTGAGAGACAGGATACATGGTTTGCTGACAACTCTCCTGTTATTCGGAACAAGGCAATTGCTCTGGCTGTTGGAGACTGGTATTTTGATCGAGAAGGTGTTAAGGCCATTGATTGTCCTTACCCTTGTGACAATACGTGTCATCATCTGACTTTCAGATGA 1257 0.42 MARLLWVGIVIGLVFRNWVDGFVGFEEHHFNETELSVLEAHEASLSLEGRNLLLVGLTLIQNADAKGAVCLDGTLPGYHLHRGYGSGANSWLINLEGGGWCNNIRTCVYRKTTRRGSSSFMEKKIPFTGILSNNVRENPDFFNWNRVKLRYCDGASFAGDGEDKTAQLQFRGQRIWAAAMEDLMSKGMRFANQALLSGCSAGGLATIIHCDEFRGFFPRTTKVKCLSDAGLFLDAMDVSGGHTLRNLYSGVVGLQGAQKNLPQICTNHLDPISCFFPQNLIANVRTPLFILNAAYDSWQIQSSLAPPSADPNGYWHDCRLNHAKCTTSQIQFLQGFRNHMLNAIKDFSRSNKNGLFINSCFAHCQTERQDTWFADNSPVIRNKAIALAVGDWYFDREGVKAIDCPYPCDNTCHHLTFR* 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0623 418 Pfam Pectinacetylesterase 54 397 IPR004963 GO:0016787
Apr4g0623 418 PANTHER NOTUM-RELATED 3 417 IPR004963 GO:0016787
Apr4g0623 418 PANTHER PECTIN ACETYLESTERASE 3 417 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0623 Apr-Chr4 5165025 5169017 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g0623 1 418 Carbohydrate Esterase AT1G57590 68.322 0.0 600
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0623 K19882 - gmx:100782401 795.423
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0623 4 5165025 5169017 Apr8g1298 8 19306227 19310966 PCT