Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0607 ATGGAAAAGATGAAGCTGATTCTCATTGCGTTGGCCTTCGTTTCTGCGGTTATCTCCGTTAGATCTGAGTCTGAGTCTTTCTCTCCACTGTCTTTGATAGAAAACGATGCCGTTCCAGTGGCAGCTCAATCTCTCATGGTCCCCCTCCATCTCATTCAAGGAGCTGCTTCTAAAGGGGCTGTATGTTTGGATGGAACATTGCCTGGTTACCACTTGCATCCTGGATTTGGATCTGGTGCAAATAGTTGGCTAATTCAATTGGAAGGAGGAGGATGGTGTAATACCATCAGAAATTGTGTCTTTAGAAAGACTACTCGTCGTGGTTCCTCAAAATACATGGAAAAACAACTACCATTCACTGGGATATTGAGCAATAAAGCTGAAGAAAACCCTGATTTCTTTAACTGGAACAGAGTGAAAGTAAGGTACTGTGATGGGGCATCTTTCAGTGGAGACAGTCAAAATGAGGCTGCTCAGCTTCAATTTCGCGGACAAAAAATATGGCTAGCTGCAATGGAGGAATTAATGTCCAAGGGAATGCAAAAGGCAAACCAGGCTCTTTTATCCGGATGCTCTGCGGGTGGTGTAGCATCTATAATACACTGTGATGAGTTCCGGAGCTTGTTTCCTACATCTACCAAAGTGAAGTGTTTGAGTGATGCGGGGTTTTTTCTTGATGAAATTGATGTATCTGGGGGGCACACACTGAGGAATCTGTTTGGAGGTGTAGTTAAATTACAGGAAGTGCAAAAAAGTCTGCCAAAGAGTTGTCTCAACAAACTGGACCCAACATCGTGCTTTTTTCCTCAGAATTTGATTAACCATGTTGAAACTCCATTGTTTCTTCTCAATGCCGCTTATGATGCATGGCAGCTCCAACAAAGTTTAGTCCCACCTTCGGCAGATCCCCATGGCTCTTGGAATGAATGTAAATCAAATCATGCAAATTGTAACTCATCTCAGATTCAGTTCCTCCAAGAATTCAGAAATCAAATGCTAAATGATGTGAAAGACTTCTCAAGCACATCTCAAACTGGATTATTCATAAATTCTTGTTTTGCTCATTGCCAGTCTGAGAGACAAGATACATGGTTTGCTGATGACTCTCCACTTATTAATAACATGCCAATTGCAATTGCTGTTGGAGACTGGTATTTTGATCGGACAGCTGTCAAAGCTATTGACTGTGCTTACCCCTGCGACAATACCTGCCACAATCTTGTCTTCAATGTTGGTAGATCTGTCATGGTGGACTCCCAGTCCACAAGTGATGATGGCACATCTACCATGATTTATTCCCGTTCCATGAGGTTGAGTTTTAGCATTGGCCTTTGTATGCTAAGTTCTTTATTGCCAATTACATGCTTCTAG 1371 0.423 MEKMKLILIALAFVSAVISVRSESESFSPLSLIENDAVPVAAQSLMVPLHLIQGAASKGAVCLDGTLPGYHLHPGFGSGANSWLIQLEGGGWCNTIRNCVFRKTTRRGSSKYMEKQLPFTGILSNKAEENPDFFNWNRVKVRYCDGASFSGDSQNEAAQLQFRGQKIWLAAMEELMSKGMQKANQALLSGCSAGGVASIIHCDEFRSLFPTSTKVKCLSDAGFFLDEIDVSGGHTLRNLFGGVVKLQEVQKSLPKSCLNKLDPTSCFFPQNLINHVETPLFLLNAAYDAWQLQQSLVPPSADPHGSWNECKSNHANCNSSQIQFLQEFRNQMLNDVKDFSSTSQTGLFINSCFAHCQSERQDTWFADDSPLINNMPIAIAVGDWYFDRTAVKAIDCAYPCDNTCHNLVFNVGRSVMVDSQSTSDDGTSTMIYSRSMRLSFSIGLCMLSSLLPITCF* 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0607 456 PANTHER PECTIN ACETYLESTERASE 2 425 - -
Apr4g0607 456 PANTHER NOTUM-RELATED 2 425 IPR004963 GO:0016787
Apr4g0607 456 Pfam Pectinacetylesterase 41 389 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0607 Apr-Chr4 5031466 5037180 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g0607 6 410 Carbohydrate Esterase AT2G46930 67.734 0.0 604
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0607 K19882 - gmx:100785270 778.474
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0607 4 5031466 5037180 Apr8g0015 8 165799 172516 PCT