Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0595 ATGAGGCATGAGAATGGCACTGATGAAGAAGATCATAAACATGATGAGACAACCGCAGCAGAGAGCAGCACAAACGGGGAAGAGAGTGAAAAGAGCAAACAGAAAGAAAAGGCTGAAACTGTCCCATATCACAGGCTGTTCTCATTTGCAGATTCCACTGATATAATTTTGATGGTTGTTGGCACCATTGGAGCAATTGGAAATGGTTTGGGGATGCCTCTCATGACATTGCTGTTCGGTCAAATGATTGATAGCTTTGGAAATAATCAATTTAGCCCTGATATTGTCAAAGAAGTTTCCAAGGTTGCTCTGAAATTTGTATACTTGGGAATAGGCACTGGTGTGGCTGCTTTCCTCCAGGTGGCTTGCTGGATGGTCACAGGGGAAAGGCAGGCTGCAAGAATTAGGAGCTTGTATTTGAAAACTATACTAAGACAAGATATTGCTTTCTTTGATAAGGAAACTAACGCTGGAGAGGTGATAGGGAGAATGTCAGGTGACACTATTCTCATACAAGATGCCATGGGTGAGAAGGTTGGGAGATTTCTGCAGCTAGTAGCAACATTTATTGGGGGCTTTGTGATAGCATTTATCAAAGGGTGGCTTCTTACTGTTGTCATGTTATCCACTCTTCCACTTCTTGTTGCAGCTGGTGCTGCTATGGCCGTTATCATAGGAAAGACAGCTTCCCGAGGTCAAACTGCGTATGCAAAAGCTGCACATGTAGTTGAACAGACAATAGGCTCAATAAGAACTGTTGCATCCTTTACTGGGGAAAAGCAAGCAGTATCTAGTTACAAGAAATTTCTTGCACATGCTTACAAATCAGGAGTTCATGAAGGTTTTGTAGCTGGAATGGGTCTTGGCATTGTTATGTTAGTTATTTTCTGTGGTTATGCTTTGGCTGTATGGTTTGGTGCAAAGATGGTGATGGAAAAAGGATATGGTGGGGGCACTGTGGTCAATGTGATTGTTGCAGTGCTAAATGCTTCCATGTCTCTTGGCCAGGCATCTCCATCCATGAGTGCTTTTGCTGCGGGTCAAGCAGCAGCTTATAAAATGTTTCAGACAATTGAGAGAAAGCCAGAGATTGATGCTTATGACCCAAATGGTAAGACACTAGAGGACATTCATGGTGAAATCCATTTAAGGGATGTTTATTTCAGTTATCCAGCCAGACCTGAAGAGTTAATATTCAATGGATTCTCTCTTCATATACCTAGTGGCACCACTGCAGCTTTGGTAGGACAAAGTGGAAGTGGGAAGTCTACGGTTATCAGTTTGATAGAAAGATTCTATGATCCCCAAGCAGGTGAAGTTCTTATTGATGGAACTAACGTGAAAGAATTTCAGCTTAGATGGATCAGAGGAAAAATTGGCCTTGTCAGCCAGGAGCCAGTGTTGTTTGCATCTAGCATAAATGATAATATTGCATATGGAAAAGAGGGAGCAACGATTGAAGAGATAAGAGCTGCAACTGAACTTGCAAATGCTGCTAAATTCATTGACAAACTACCACAGGGATTGGACACAATGGTTGGTGAGCATGGAACTCAACTATCCGGTGGACAGAAGCAGCGCATTGCCATTGCAAGAGCAATCCTGAAAGATCCAAGAATTCTACTTCTAGATGAAGCTACGAGTGCACTTGATGCTGAGTCTGAAAGGATAGTGCAACAAGCTCTGGATAGGATTATGGTCAACAGGACTACTGTTATTGTTGCGCATCGCTTGAGCACAGTGAGGAATGCTGATATGATCGCTGTAATTCATAGAGGAAAAATGGTTGAGAAAGGAACACACATAGAATTAATCAAGGATCCTGAAGGAGCTTACTCTCAACTTATACGTTTACAAGAAGGAAGCAAGAAGGAATCAGAAGAAACAACGGACAATCAAAACAAGAGGGAACTTTCCTCAGAATCCTTTACAAAGTTGAGTCAAAGGCGGTCTTTTCAAAGATCAGGATCATCTGTTGGAAATAGTAGCCGCCACTCATTTTCAATTTCATTTGGTTTACCTACAGGAGTTAACATCCCCGATCCTGCTGATCTTGAACTTGAAACTTTAGAGCCTAAAGAACAATCCCCAGAAGTGCCAATCCAGCGTCTTGCTTCTCTGAACAAGCCAGAGATTCCTGTGCTTCTGATTGGATGTGTAGCTGCCATAGCAAATGGTACCATATTTCCAATATTTGGTGTGTTACTCTCCCGTGTTATCAAAACATTTTTTGAACCATTTCCGGAGATGAAAAAGGACTCCAAGTTTTGGGCACTCATGTTTGTGACCCTTGGAGTTGGATCTTTAGTGGCTATTCCAGCTCGAGGTTACTTCTTCTCTATGGCTGGCAGTAAGTTAATCCAACGTATTAGACTCATCTGTTTTGAGAAGGTGATCAACATGGAGGTTGGTTGGTTTGATGAGCCTGAGCACTCTAGTGGTGTAATTGGTGCAAGGCTCTCAGCAGATGCTGCATCTGTGCGTGCCCTTGTTGGTGATGCTCTGGGACTACTGGTTCAAAATATAGCAACAGCATTGGCAGGTTTGATTATTGCTTTCACTGCATGCTGGCAATTGGCATTGATTATTCTTGTCTTGGTTCCCCTCATTGGAATGAATGGCTATGTTCAAATGAAATTCATGAAGGGGTTTAGTGCAGATGCAAAGATGATGTATGAGGAAGCAAGCCAAGTTGCTAATGATGCAGTTGGAAGCATAAGAACAGTAGCTTCTTTTTGTGCTGAAGAGAAAGTTATGGAACTGTACAAGAAGAAATGTGAAGGTCCCATGGAAACTGGGATACGACAAGGCTTGATCAGTGGAACAGGATTTGGGGTTTCATTTTTCTTGCTCTTCTGTGTCTATGCAACCAATTTCTATGCTGGAGCCAGATTTGTGGGAGCTGGCAAAGCATCATTCTCAAATGTTTTCCAGGTTTTCTTTGCTTTAACTATGGCATCTATTGGAATTTCCCAATCAAGCTCCCTTGCTCCTGATTCAAGCAAAGCCAAGATAGCCACCGCTTCCATATTTAGAATAATGGATAGAAAATCAAAGATAGACCCAAGTGATGAGTCTAGTGGCACATTGGATAATGTAAAGGGAGAAATAGAGCTTCGTCATGTAAGCTTTAAGTATCCATCTAGGCCAGATATACAGATTTTTCGAGACCTAAGCTTGACTATCCATTCTGGCAAGACTGTGGCCCTTGTTGGTGAAAGTGGAAGTGGGAAATCCACAGTGATTGCCTTGTTACAAAGATTTTATGATCCTGATTCTGGTCAAATTACACTTGATGGAATACAAATTCAGAATTTACAACTCAAGTGGTTAAGGCAGCAGATGGGACTTGTAAGCCAAGAGCCAGTGTTGTTCAATGACACCATCCGTGCCAATATTGCATATGGAAAGAACGGGAATGCCACTGAAGCAGAAATCATAACTGCAGCAGAACTGGCCAATGCACATGGTTTTATCAGTGGCTTACAACAGGGTTACGATACAGTAGTGGGTGAAAGAGGGATCCAGCTATCTGGTGGGCAAAAGCAACGGATAGCCATTGCACGTGCCATAATAAAAAGTCCAAAGATATTGCTACTAGATGAAGCCACTAGTGCACTAGATGCTGAGTCAGAGAGAGTTGTTCAAGATGCATTAGACAAAGTGATGGTGAATAGGACCACTGTGGTTGTGGCACATCGTTTATCTACAATAAAGAATGCAGATGTGATTGCAGTGGTAAAAAATGGAATTATAGTGGAGAAAGGTAGGCATGACACGCTCATTAACATCAAGGATGGATCTTACGCTTCCTTAGTGCAACTTCATACAAGTGCTAAAACAGCGTGA 3849 0.4222 MRHENGTDEEDHKHDETTAAESSTNGEESEKSKQKEKAETVPYHRLFSFADSTDIILMVVGTIGAIGNGLGMPLMTLLFGQMIDSFGNNQFSPDIVKEVSKVALKFVYLGIGTGVAAFLQVACWMVTGERQAARIRSLYLKTILRQDIAFFDKETNAGEVIGRMSGDTILIQDAMGEKVGRFLQLVATFIGGFVIAFIKGWLLTVVMLSTLPLLVAAGAAMAVIIGKTASRGQTAYAKAAHVVEQTIGSIRTVASFTGEKQAVSSYKKFLAHAYKSGVHEGFVAGMGLGIVMLVIFCGYALAVWFGAKMVMEKGYGGGTVVNVIVAVLNASMSLGQASPSMSAFAAGQAAAYKMFQTIERKPEIDAYDPNGKTLEDIHGEIHLRDVYFSYPARPEELIFNGFSLHIPSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGTNVKEFQLRWIRGKIGLVSQEPVLFASSINDNIAYGKEGATIEEIRAATELANAAKFIDKLPQGLDTMVGEHGTQLSGGQKQRIAIARAILKDPRILLLDEATSALDAESERIVQQALDRIMVNRTTVIVAHRLSTVRNADMIAVIHRGKMVEKGTHIELIKDPEGAYSQLIRLQEGSKKESEETTDNQNKRELSSESFTKLSQRRSFQRSGSSVGNSSRHSFSISFGLPTGVNIPDPADLELETLEPKEQSPEVPIQRLASLNKPEIPVLLIGCVAAIANGTIFPIFGVLLSRVIKTFFEPFPEMKKDSKFWALMFVTLGVGSLVAIPARGYFFSMAGSKLIQRIRLICFEKVINMEVGWFDEPEHSSGVIGARLSADAASVRALVGDALGLLVQNIATALAGLIIAFTACWQLALIILVLVPLIGMNGYVQMKFMKGFSADAKMMYEEASQVANDAVGSIRTVASFCAEEKVMELYKKKCEGPMETGIRQGLISGTGFGVSFFLLFCVYATNFYAGARFVGAGKASFSNVFQVFFALTMASIGISQSSSLAPDSSKAKIATASIFRIMDRKSKIDPSDESSGTLDNVKGEIELRHVSFKYPSRPDIQIFRDLSLTIHSGKTVALVGESGSGKSTVIALLQRFYDPDSGQITLDGIQIQNLQLKWLRQQMGLVSQEPVLFNDTIRANIAYGKNGNATEAEIITAAELANAHGFISGLQQGYDTVVGERGIQLSGGQKQRIAIARAIIKSPKILLLDEATSALDAESERVVQDALDKVMVNRTTVVVAHRLSTIKNADVIAVVKNGIIVEKGRHDTLINIKDGSYASLVQLHTSAKTA* 1283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0595 1282 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 59 346 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Apr4g0595 1282 PANTHER ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL 16 1278 - -
Apr4g0595 1282 MobiDBLite consensus disorder prediction 1 37 - -
Apr4g0595 1282 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 370 619 IPR027417 -
Apr4g0595 1282 MobiDBLite consensus disorder prediction 619 664 - -
Apr4g0595 1282 CDD ABC_6TM_Pgp_ABCB1_D1_like 58 342 - -
Apr4g0595 1282 MobiDBLite consensus disorder prediction 636 664 - -
Apr4g0595 1282 CDD ABC_6TM_Pgp_ABCB1_D2_like 705 1020 - -
Apr4g0595 1282 Pfam ABC transporter 400 548 IPR003439 GO:0005524
Apr4g0595 1282 Pfam ABC transporter 1056 1205 IPR003439 GO:0005524
Apr4g0595 1282 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 716 1002 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Apr4g0595 1282 Gene3D - 1028 1281 IPR027417 -
Apr4g0595 1282 Gene3D ABC transporter type 1, transmembrane domain 104 1011 IPR036640 GO:0005524|GO:0016021
Apr4g0595 1282 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 381 617 IPR003439 GO:0005524
Apr4g0595 1282 CDD ABC_MTABC3_MDL1_MDL2 381 619 - -
Apr4g0595 1282 ProSitePatterns ABC transporters family signature. 520 534 IPR017871 GO:0005524
Apr4g0595 1282 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1037 1274 IPR003439 GO:0005524
Apr4g0595 1282 ProSitePatterns ABC transporters family signature. 1177 1191 IPR017871 GO:0005524
Apr4g0595 1282 Gene3D - 379 637 IPR027417 -
Apr4g0595 1282 SUPERFAMILY ABC transporter transmembrane region 702 1021 IPR036640 GO:0005524|GO:0016021
Apr4g0595 1282 SMART AAA_5 1064 1257 IPR003593 -
Apr4g0595 1282 SMART AAA_5 408 580 IPR003593 -
Apr4g0595 1282 Pfam ABC transporter transmembrane region 715 987 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Apr4g0595 1282 Pfam ABC transporter transmembrane region 59 331 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Apr4g0595 1282 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1029 1275 IPR027417 -
Apr4g0595 1282 MobiDBLite consensus disorder prediction 620 635 - -
Apr4g0595 1282 CDD ABC_MTABC3_MDL1_MDL2 1037 1275 - -
Apr4g0595 1282 PANTHER - 16 1278 - -
Apr4g0595 1282 SUPERFAMILY ABC transporter transmembrane region 39 365 IPR036640 GO:0005524|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0595 Apr-Chr4 4920504 4926121 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g0595 33 1281 Calmodulin-binding Proteins AT2G36910 44.092 0.0 1052
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0595 K05658 - gmx:100802547 2181.76