Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0592 ATGGAGAATGAACCCTTTCTAATTCTCAACACTCCCCAAATCATCGAACGTTCCGATTTGCCCTTCTCATCTTCCAAGTCCTTCAACGATGTCACCACCTTGCAAGAAGCCCCACGTGTGGGAAATTCAGAGATACAATCCTTCAATGAACACCACCAACCATTGCTTCCAAAGAAGAAACTTAGTCGTTGCAAGACAGCCCCTGCTATGGTTGCCATGCGAGACCTCAAACCTAAGACACCCCAAGTTCCCAAACCTCAATCTAGTTCCATAATTCGACAAGGCATTTGGTTACTTGTCGTGTATCTCTTCGTGGGAGTGGTTATATACTCTTACAATAGGAACCATTTTTCTGGCATAGAGACACACCCTGTAGTGGATGCCCTTTACTTTTGTATAGTTACCATGTGTACCATAGGTTATGGGGATATAGCTCCTTTAACTCCAGTTACAAAGGTTTTTGCTTGTGTTTTTGTTTTGGTGGGGTTTGGGTTTATTGATATTCTCCTCAGTGGGCTTGTAAACTTTGTATTAGATTTGCAAGAGAAAGTGATTCTGACCAGTCTCCAAATGGGTGCTAGGGAGGGTTTCTCTGCAAGTAATTACATAGTTGATGTGGCAAAGGGTAGGATGAGGATTAGATTGAAGGTTGGTTTGGCACTTGGTATTGTGGTTTTGTGTATTGGAATTGGGAGTTTGGTGTTGTACTTTGTGGAGGGTTTGGAATTTGTTGATTCTATTTACTTGTCGGTTATGTCTGTCACAACGGTTGGGTATGGAGACAGAGCCTTTAAGACCCTTCCGGGTCGGTTATTTGCGGCTATTTGGCTCCTCTTTTCTACTTTGATGGTGGCACGGGCATTCCTCTATTTGGCTGAGGCTAGAATTGATAGAAGACATAGGAGAATGGCTAAGAAGGTTTTGCAAAGAGAAATCACTATTGAGGATTTGCTTGCTGCTGATATCAACAACACTGGTTTTATCAGTAAGTCAGAGTATGTAATCTTCAAGCTGAAAGAGATGGGTAAAATACAGGAAAAAGATGTGTTGCTAATTTGTGAGCAATTCAGGAAACTTGACCCCTCTAATTGTGGGAAGATAACACTTCCTCATCTCTTGGAGGACAGATCATGA 1134 0.4215 MENEPFLILNTPQIIERSDLPFSSSKSFNDVTTLQEAPRVGNSEIQSFNEHHQPLLPKKKLSRCKTAPAMVAMRDLKPKTPQVPKPQSSSIIRQGIWLLVVYLFVGVVIYSYNRNHFSGIETHPVVDALYFCIVTMCTIGYGDIAPLTPVTKVFACVFVLVGFGFIDILLSGLVNFVLDLQEKVILTSLQMGAREGFSASNYIVDVAKGRMRIRLKVGLALGIVVLCIGIGSLVLYFVEGLEFVDSIYLSVMSVTTVGYGDRAFKTLPGRLFAAIWLLFSTLMVARAFLYLAEARIDRRHRRMAKKVLQREITIEDLLAADINNTGFISKSEYVIFKLKEMGKIQEKDVLLICEQFRKLDPSNCGKITLPHLLEDRS* 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0592 377 Pfam Ion channel 98 177 IPR013099 -
Apr4g0592 377 Pfam Ion channel 224 293 IPR013099 -
Apr4g0592 377 Gene3D - 200 321 - -
Apr4g0592 377 Gene3D - 72 193 - -
Apr4g0592 377 SUPERFAMILY Voltage-gated potassium channels 88 177 - -
Apr4g0592 377 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 43 372 IPR003280 GO:0005267|GO:0016020|GO:0071805
Apr4g0592 377 PANTHER TWO-PORE POTASSIUM CHANNEL 4-RELATED 43 372 - -
Apr4g0592 377 SUPERFAMILY Voltage-gated potassium channels 208 314 - -
Apr4g0592 377 PRINTS Two pore domain K+ channel signature 134 162 IPR003280 GO:0005267|GO:0016020|GO:0071805
Apr4g0592 377 PRINTS Two pore domain K+ channel signature 255 264 IPR003280 GO:0005267|GO:0016020|GO:0071805
Apr4g0592 377 ProSitePatterns EF-hand calcium-binding domain. 321 333 IPR018247 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0592 Apr-Chr4 4897716 4899910 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g0592 49 375 Ion Channels AT4G01840 68.060 4.29e-160 454
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0592 K05389 - gmx:100801488 600.897