Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0586 ATGGCAGTGTCTGTGATAAGAACAAAACGAGGCTTAGTTAAACCAGCTGAGGAAACTCCATTGATCACACTGGACCTATCAGCCATCGATAGATTACCTGTTCTAAGATGCAATGCTAGAACCTTACACGTGTTCAGACATGGCCCTGAAGCTGCAAGGGTCATAAGAGAGGCCTTGTCCAAAGCACTGGTTCCTTATTACCCTCTTGCAGGAACACTCGCTGAATCCAAACCAGGGTGCCTCCAAATTCAGTGCTCTGGTGATGGCGTGTGGTACGTTGAGGCATGTGCTGATTGTACCCTTGAATCTGTCAATTTCTTTGATGATGTTCAGTCTCTTCCATATGATGATCTTCTTCCTGATGATATTCCTGAGATCAAACACGTCGAACCCCTCGTGCAAATGCAGGTGACACAATTTGGTTGTGGGGGTTTTGTGATAGGCCTCATATTCTGCCATAGCATATGCGATGGTCTAGGAGCTGCACAGTTTCTAAATGCCGTTGGGGAGCTAGCAAGGGGTCATGAAAAAGCCAGCATCGAACCAGTGTGGCAAAGGGACTTTTTCCCATCTCCTCAAACACCCCAAGAAGCTACATTGCCACCAAAGCTACCCCCACTTCAAATACCAGAATACAAGCTAGAGCATGCAAACATAGACATGCCCATGGATCAAAGCATCCTTCTGAAGAAAGAATTTCAACAAGTAACTGGACTCGGTTGCTCTGTCTTCGAGATTGTAGCTGCAGCATGTTGGAGAAGCCGAACAAGAGCCATTAAATTGGAACCCAAAACTCAACTGAAGCTTGTGTTCTTTGCAAATTGCCGTCATCTCTTGGACCCTGTTCTACCCGATGGTTTATACGGAAACTGTTTTTTCCCAGTGACGATCACAGCTTCATTTGAGTCCCTTAGAGAGGCTGTGATGATTGATGTGGTGAAGCTGATCCAAGAAGCAAAAGCCAAGTTACCCGTTGAATTTGGAAAGTACTTGAAAGGTGAACATTTGCAAGGTGGAGAGAAAGAGGACCCATTTGCACCTCCACTCACCTACACTACTATGTTCATATCAGAATGGGGAAGGCTAGGATTCAACCACGTGGACTACAAGTGGGGTCCACCTGTCCACGTGGTTCCCATACAAGGCTCCACCATTATACCCGTGGCCATTGTAGGGTCCATGCCTCTACCAAACAAAGGGGTTAGCTTGATGACGTGGTGCGTGGAGGAGCCACATCGAGTTCCTTTCCTTAATCACATGAGTGGAGTCGTGAATGGGGAAATGATATAA 1290 0.4651 MAVSVIRTKRGLVKPAEETPLITLDLSAIDRLPVLRCNARTLHVFRHGPEAARVIREALSKALVPYYPLAGTLAESKPGCLQIQCSGDGVWYVEACADCTLESVNFFDDVQSLPYDDLLPDDIPEIKHVEPLVQMQVTQFGCGGFVIGLIFCHSICDGLGAAQFLNAVGELARGHEKASIEPVWQRDFFPSPQTPQEATLPPKLPPLQIPEYKLEHANIDMPMDQSILLKKEFQQVTGLGCSVFEIVAAACWRSRTRAIKLEPKTQLKLVFFANCRHLLDPVLPDGLYGNCFFPVTITASFESLREAVMIDVVKLIQEAKAKLPVEFGKYLKGEHLQGGEKEDPFAPPLTYTTMFISEWGRLGFNHVDYKWGPPVHVVPIQGSTIIPVAIVGSMPLPNKGVSLMTWCVEEPHRVPFLNHMSGVVNGEMI* 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0586 429 Gene3D - 206 413 IPR023213 -
Apr4g0586 429 Coils Coil 426 429 - -
Apr4g0586 429 Pfam Transferase family 5 383 - -
Apr4g0586 429 PANTHER ACYL TRANSFERASE 4 1 422 - -
Apr4g0586 429 Gene3D - 1 203 IPR023213 -
Apr4g0586 429 PANTHER ACYL TRANSFERASE 4 1 422 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0586 Apr-Chr4 4869492 4871192 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g0586 12 379 Monolignol Biosynthesis Gene Families AT5G48930 29.293 7.66e-34 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0586 - - gmx:100783128 684.871