Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0555 ATGGAGAACAAGGAGATGATGGGTGTGAAGATGGAGGATTATGCCGTAGGATCTTCTTCCTTTCCTTGCCCTCCATTCTTTGATTTTTCTGAAGATAAAAGCACTTTAGGGTTTATGGAGTTATTGGGTGTGCAAGACTATAGTCCTCTTCTTGATTTGCCTCTATTGGCAAACGTGTCTGTGCCTCTAACCTCTGCTGTTAAGGAACAACCTGAGACTGGGAAAGAGTGTTCCGAGGTGTTGAACCAACAACAACCTGCCACTCCAAATTCTTCATCCATTTCGTCTGCGTCCAGTGAAGCAGTCAATGATGAACAGAATAAAACTGTAGACCAAGCACATGAACAGCAAAAGACAAAGGAACAGTTGAAGGCCAAAAAGACAAATCAGAAGAGACAGAGAGAACCGAGATTCGCGTTCATGACGAAAAGCGAGGTCGATCATCTGGAAGATGGGTACAGATGGAGAAAGTACGGTCAAAAAGCTGTGAAAAACAGCCCCTTTCCTCGGAGCTACTATCGTTGCACCAGTGCTTCATGTAATGTGAAGAAACGTGTGGAGCGATCTTTTAATGATCCAAGCATTGTAGTGACAACCTACGAAGGCCAACACACACATCCGAGCCCAGTTATAACTCGCTCAGGAGTTTCTACTGGGTGTGCCGACAAATTTGGTTCAGTAATGGGTGGATCTGGGAACTACATGTCCCAATATTATCAGCACAATCAACAAGTCCACGTCAATACATTGTCTTCTTTGGGTTTTCCTCCTCCTTCTTCAAAGAATGTCTCTTTTCCTCAAGAGAGACTGTTTTGTAATCCAGGGTCGACTGCATTGTTATGTGACCATGGCCTTCTTCAAGATGTTGTTCCTTCTCACATGTTGAAGGAAGAGTAA 897 0.4392 MENKEMMGVKMEDYAVGSSSFPCPPFFDFSEDKSTLGFMELLGVQDYSPLLDLPLLANVSVPLTSAVKEQPETGKECSEVLNQQQPATPNSSSISSASSEAVNDEQNKTVDQAHEQQKTKEQLKAKKTNQKRQREPRFAFMTKSEVDHLEDGYRWRKYGQKAVKNSPFPRSYYRCTSASCNVKKRVERSFNDPSIVVTTYEGQHTHPSPVITRSGVSTGCADKFGSVMGGSGNYMSQYYQHNQQVHVNTLSSLGFPPPSSKNVSFPQERLFCNPGSTALLCDHGLLQDVVPSHMLKEE* 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0555 298 Pfam WRKY DNA -binding domain 150 207 IPR003657 GO:0003700|GO:0006355|GO:0043565
Apr4g0555 298 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 15 290 IPR044810 GO:0003700
Apr4g0555 298 MobiDBLite consensus disorder prediction 69 135 - -
Apr4g0555 298 ProSiteProfiles WRKY domain profile. 144 209 IPR003657 GO:0003700|GO:0006355|GO:0043565
Apr4g0555 298 SUPERFAMILY WRKY DNA-binding domain 141 209 IPR036576 GO:0003700|GO:0006355|GO:0043565
Apr4g0555 298 MobiDBLite consensus disorder prediction 107 135 - -
Apr4g0555 298 PIRSF WRKY_txn_fact_IIc 1 298 IPR017396 GO:0003700
Apr4g0555 298 Gene3D WRKY domain 134 210 IPR036576 GO:0003700|GO:0006355|GO:0043565
Apr4g0555 298 SMART WRKY_cls 149 208 IPR003657 GO:0003700|GO:0006355|GO:0043565
Apr4g0555 298 Coils Coil 113 133 - -
Apr4g0555 298 MobiDBLite consensus disorder prediction 76 106 - -
Apr4g0555 298 PANTHER WRKY TRANSCRIPTION FACTOR 15 290 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0555 Apr-Chr4 4606796 4608762 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g0555 27 298 WRKY Transcription Factor Family AT2G47260 47.788 8.40e-70 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Apr4g0555 WRKY 5.9e-27 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0555 - - gmx:100816452 427.172
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0555 4 4606796 4608762 Apr8g0060 8 511631 513802 PCT