Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0547 ATGAGGAATTTACATACAACTATGGACAGTAATACTAATGCCTCCCTCCAACTTGAGTCAGAGGCATCTTCAGAGCTCAAATCAGAAACTCAAACATCCAAGAAAAGGAAAATGGTTCAGAAAACAGTTGTGGCAGTGAGGATAGGAGAGAATGTTAGCAAGCTGAAGAATGAAGGGTTACCTTCTGATTTTTGGTCTTGGAGAAAATATGGACAAAAGCCAATCAAAGGGTCTCCATATCCAAGGGGTTATTACAGGTGCAGCACATCCAAAGGTTGTTCAGCCAAAAAGCAAGTAGAGAGATGCAAGACAGATTCTTCAATGCTCATCATTACCTACACCTCTACACATAACCATCCAGGCCCAACTACAATTACCACCACAAATTCACCACCCCAACAACCAAATGAAACCGAAAATACCGAAGATCTCTCAGCTACATCAAAGGAGGATGACCAAGAACATATAGAAGAACAAACAAATAATAATCATAAGCCTACTCTTATGATCAATGATGAGGGTACAAGTGAAGAAAATTTTCATTACTTGCAATCTCCAATTCCCGAATACATCATTGTAGATCAAGAAGATCCTTTCAAACTAAACATGGAGAAAAGCCATGAAAGCATAGATATCCTCTTAGAGGAAGAGCCCTTTTGTTACCCACAGTTGAAGAGCTTTTCTACTTCCAAATCAGAAGAACTTGACTTTTTCGATGAGCTTGAGGAGTTACCCATGTCTTCATCTTTCTTACACTTTACGAGGAGCGTTTTTTCTGATGAAAGGATTCCCGTTGCCCCTTCTTGA 807 0.3965 MRNLHTTMDSNTNASLQLESEASSELKSETQTSKKRKMVQKTVVAVRIGENVSKLKNEGLPSDFWSWRKYGQKPIKGSPYPRGYYRCSTSKGCSAKKQVERCKTDSSMLIITYTSTHNHPGPTTITTTNSPPQQPNETENTEDLSATSKEDDQEHIEEQTNNNHKPTLMINDEGTSEENFHYLQSPIPEYIIVDQEDPFKLNMEKSHESIDILLEEEPFCYPQLKSFSTSKSEELDFFDELEELPMSSSFLHFTRSVFSDERIPVAPS* 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0547 268 ProSiteProfiles WRKY domain profile. 56 122 IPR003657 GO:0003700|GO:0006355|GO:0043565
Apr4g0547 268 PANTHER WRKY TRANSCRIPTION FACTOR 69-RELATED 10 253 - -
Apr4g0547 268 MobiDBLite consensus disorder prediction 1 35 - -
Apr4g0547 268 SUPERFAMILY WRKY DNA-binding domain 58 122 IPR036576 GO:0003700|GO:0006355|GO:0043565
Apr4g0547 268 Pfam WRKY DNA -binding domain 63 120 IPR003657 GO:0003700|GO:0006355|GO:0043565
Apr4g0547 268 SMART WRKY_cls 61 121 IPR003657 GO:0003700|GO:0006355|GO:0043565
Apr4g0547 268 MobiDBLite consensus disorder prediction 143 161 - -
Apr4g0547 268 Gene3D WRKY domain 46 123 IPR036576 GO:0003700|GO:0006355|GO:0043565
Apr4g0547 268 MobiDBLite consensus disorder prediction 1 27 - -
Apr4g0547 268 MobiDBLite consensus disorder prediction 115 142 - -
Apr4g0547 268 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 10 253 IPR044810 GO:0003700
Apr4g0547 268 MobiDBLite consensus disorder prediction 115 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0547 Apr-Chr4 4542770 4544583 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g0547 1 123 WRKY Transcription Factor Family AT2G34830 53.030 4.66e-37 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Apr4g0547 WRKY 1.8e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0547 - - gmx:100127368 394.43