Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0545 ATGAAAATTGACCAATTTTCTTCCACAACTTTAAATTTCAAAGGAATTCATGAGGATTATGGCTCTATAGAAGAGGTTGTATTCCAAGGGAAAGACAATTTCTCTGAAATGGAATTGATGGGAGAGATTGATCCCCTGCCTCCTGAGAATGGAAAAGGAGCTAATTTGTTCGAAGGTCAAAATCAGCAGCAGCAAGAACAACCTAAAGTTGATAACTTGATGTTAGAAGAGATCAACTACTTCGACCCTGATATGCAAGTGCAACCAACACAACTATTTCAGGAAACTACAAGGCTAAAGAAACATGGAGTGGCAAATTCAGAATCAGTTGAATACAATAAACAGACGCCACCCTCTTTCGCATCCTTAGAGCTTCTGCGAAATTACGGAAGCAGGTTCAAGAAGCTAAGCGAACCAAGTACAAGCACCTTTAGCAATATTGAAACTTCTTTGGATCACCAGAAGATGTCAACTGAAGAAATAATAAGATTGGCCGGAGCAAGGTATGTCCAATACTCTGCACATTGGAATGATAGTTTTTGTCTACCTATGCACCCATATGGATTGGAACTTGGGAGTTTGTCCGAGGAAGAAAATAGAGATGTGGAACTTGCTCAGTTTCTCCTAGCTGCAGCTGAGAGGGTAGGGTGCAAACAATTTGAACGTGCTAGCAGGTTACTTCAACATTGTCAATGGAATTCATCTAGAAGTGCAAGTCCTGTTCAAAGAGTTATTTTTCATTTCGCTCAAGCACTTCGAGAGAGAATAGACAAAGAAACAGGAAGGATGACACTTAAGGTATCGGAGAAAAATGAAGAAAGGGAGTTAATTCAAAAGATGGATACCAACACTTCCCTCACATGCCATCAAAATATTCCATTCAATCAAGTGATGCAATTCACTGGAATACAAACTATAGTGGAACATGTTGCATGTGAGACAAAAATCCATCTTATAGATCTTGAAATAAAAAATGGGGTGCATTGCACAGCTTTGATGCAAGCACTGACAGAACGCCAGAATTACTCAGTGGAACTTTTTAAGATCACTGCCATTGCACTTGAGACATGCAAAGCCATGATAGAAGAAACAGGCAAAAGGTTAGCTAGTTTTGCTGAATCCTTGAACTTACCCTTTTCATATAAGGCAATTTTCGTTATAGATATGGCAGAAATAAGGGAAGATCATTTTGAAATGGAAGATGATGAAGCTGTTGCTGTATATTCCCCATATTTTCTAAGGTACTTGGTGTCAAGGCCCAAGTGTATGGAAAATTTGATGTGGGTTATAAGAAATATTAAGCCAAGAATAATGATAGTACTTGAAGTAGAAGCAAACCACAACTCTCCCTCCTTTGTGAATCGCTTCATTGAAGCGTTGTTCTCCTACTCAGCCTTTTTTGATTGCCTTGAAACCTGCATAAAAGAGGAGACTGGGTGTAGAATGACAACTGAAGCAATATTATCTGAAGGGATACGAAACATTGTTGCTATGGAAGGAAGGGAAAGGACAGTAAGGAATGTGAAAATAGATGTTTGGAGAAGGTTCTTTGCAAGGTATCGAATGGTGGAAACCGGGTTTAGTGAGTCATCTATGTACCAAGCTGAGTTGGTCGCCAAAGAGTTTGCTTTTGGTAAATTCTGCACTATTGACAAGAATGGCAAGGGTCTCGTTGTTGGATGGAAGGGGACTCCTTTGCATTCAATCTCAGCTTGGAGGTTTCTTTGA 1728 0.3958 MKIDQFSSTTLNFKGIHEDYGSIEEVVFQGKDNFSEMELMGEIDPLPPENGKGANLFEGQNQQQQEQPKVDNLMLEEINYFDPDMQVQPTQLFQETTRLKKHGVANSESVEYNKQTPPSFASLELLRNYGSRFKKLSEPSTSTFSNIETSLDHQKMSTEEIIRLAGARYVQYSAHWNDSFCLPMHPYGLELGSLSEEENRDVELAQFLLAAAERVGCKQFERASRLLQHCQWNSSRSASPVQRVIFHFAQALRERIDKETGRMTLKVSEKNEERELIQKMDTNTSLTCHQNIPFNQVMQFTGIQTIVEHVACETKIHLIDLEIKNGVHCTALMQALTERQNYSVELFKITAIALETCKAMIEETGKRLASFAESLNLPFSYKAIFVIDMAEIREDHFEMEDDEAVAVYSPYFLRYLVSRPKCMENLMWVIRNIKPRIMIVLEVEANHNSPSFVNRFIEALFSYSAFFDCLETCIKEETGCRMTTEAILSEGIRNIVAMEGRERTVRNVKIDVWRRFFARYRMVETGFSESSMYQAELVAKEFAFGKFCTIDKNGKGLVVGWKGTPLHSISAWRFL* 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0545 575 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 52 573 - -
Apr4g0545 575 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 52 573 IPR005202 -
Apr4g0545 575 ProSiteProfiles GRAS family profile. 195 573 IPR005202 -
Apr4g0545 575 Pfam GRAS domain family 205 573 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0545 Apr-Chr4 4532823 4534898 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g0545 202 574 GRAS Transcription Factor Family AT1G66350 29.412 1.63e-48 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Apr4g0545 GRAS 6.9e-81 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0545 - - gmx:100791952 880.552