Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0519 ATGGCGACGAGGAATCGAACTCTACAGTTCAGAAAGCACAGAGACGCCGTGAAGAGCGTGCGTGCTCCTCTCTCTTCTTCCGCATCTGCTTCCACCGGTCCCGTCATTGAAATGGTTAGCACTTCGCTTCTTCGTTCAAATCGCTCCTCTTATGCCCCTTTAAGCACCGAAGATCCAGGTCCAGCCACCTCTAGGGATGCATTTACTGTGGGATTGCCTCCATCTTGGGTGGATGATTCTGAGGAAATTGCTACAACTATACAACGTGCTCGTGTTAAAATTTCTGAGTTAACCAAAGCTCATGCTAAGGCTTTAATGCCCTCGTTTGGTGATGGCAAAGAGGATCAGCGTCATATTGAGACTCTCACCCAAGAAATTACGTCTCTCCTCAGAAAGTCTGAAATGCGGCTTAAAAGATTTTCTGCTGCTGGTGGATCTTCTGAGGATTCAAATGTCAGAAAAAATGTGCAGGATGTGCTTGTGTTTGTGAGTTATGAGGGAAAGGGAAGGAAGGGAAATTTAAGGCGTTCCCTTGCTACAGACCTTCAGAACCTGTCAATGGATCTCCGGCGAAAACAGTCAGCATACTTGAAACGTTTGCAGCAGCAAAAAGAGGGTTATGATGGGGTTGACTTGGAGATGAACTTCAATGGGAGTAAATATGGATCACATAATGATGGATTTGATGATGTGGGTTTTAGTGAAGAGCAAATGACAAAGCTAAAGAAAAGTGAGCAGTTCTCAGAGGAAAGGGAAAGAGAGATTGAACAGGTTGCTAAATCAGTCCATGAACTTGCTCAAATCATGAAGGATCTCTCGGTCCTTGTGATAGATCAGGGAACTATTGTGGATAGAATTGACTACAACATTCAGAGCGTTGCAACATCCGTTGAGGAGGGCTTCAAGCAGTTACAAAAGGCAGAGAGAACGCAGAAAAAAGGAGGAATGGTTATGTGTGCAACAGTGCTTGTTATAATGTGCGTTGTCATGATAGTTCTCTTGATATTCAAGGAGATCATCTTTTAG 1026 0.4415 MATRNRTLQFRKHRDAVKSVRAPLSSSASASTGPVIEMVSTSLLRSNRSSYAPLSTEDPGPATSRDAFTVGLPPSWVDDSEEIATTIQRARVKISELTKAHAKALMPSFGDGKEDQRHIETLTQEITSLLRKSEMRLKRFSAAGGSSEDSNVRKNVQDVLVFVSYEGKGRKGNLRRSLATDLQNLSMDLRRKQSAYLKRLQQQKEGYDGVDLEMNFNGSKYGSHNDGFDDVGFSEEQMTKLKKSEQFSEEREREIEQVAKSVHELAQIMKDLSVLVIDQGTIVDRIDYNIQSVATSVEEGFKQLQKAERTQKKGGMVMCATVLVIMCVVMIVLLIFKEIIF* 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0519 341 PANTHER SYNTAXIN 1 336 IPR045242 -
Apr4g0519 341 PANTHER SYNTAXIN OF PLANTS PROTEIN 1 336 - -
Apr4g0519 341 SUPERFAMILY t-snare proteins 72 300 IPR010989 GO:0016020|GO:0016192
Apr4g0519 341 SMART tSNARE_6 240 307 IPR000727 -
Apr4g0519 341 Pfam SNARE domain 281 333 IPR000727 -
Apr4g0519 341 Gene3D - 73 299 - -
Apr4g0519 341 SMART SynN_4 67 201 IPR006011 GO:0016020
Apr4g0519 341 CDD SNARE_syntaxin16 249 306 - -
Apr4g0519 341 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 245 307 IPR000727 -
Apr4g0519 341 ProSitePatterns Syntaxin / epimorphin family signature. 251 290 IPR006012 GO:0005484|GO:0006886|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0519 Apr-Chr4 4311289 4316522 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g0519 1 330 SNARE and Associated Proteins AT3G05710 66.472 2.35e-156 439
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0519 K08489 - gmx:100803629 528.865