Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0515 ATGGCGGCAGAGGCGGCATTGTTCTTTTCTGTTGCATCGGTGGTGGAGGATGTGCTTCAACAGCACGGTCCTCCACTCAAGGATCTTGATTTGGAATCTAGGAAAGCCGAAGAAGCTGCATCGAGAAGATATGAAGCTGCAGGGTGGTTGAGAAAAATGGTTGGTGTAGTTGCAGCTAAAGATTTACCAGCTGAGCCCTCTGAGGAAGAGTTTAGGCTTGGTTTGAGAAGTGGGATTATTCTGTGTAATGTTATTAACAAAGTTCAATCCGGAGCAGTACCCAAGGTGGTTGAGAGTCCTGTTGATTCTGCATTGATCCCTGATGGAGCACCATTAACTGCATATCAGTATTTCGAAAACGTGAGGAATTTCCTTGTGGCTGTCCAAGAAATTGGACTTCCTACCTTTGAGGCATCTGATCTGGAACAAGGAGGAAAATCATCTAGGATTGTGAATTGCGTCTTGGCTCTGAAATCCTATAGTGAATGGAAAATGACTGGGGCAAATGGTGCGTGGAAATTTGGTGGAAATCTCAAACCTACTATCGCTGCAAAGTCGTTTGTGAGAAAAAATTCGGAGCCATTTACTAATTCCTTGTCAAGGACTTCATCGGCTAATGAAAAATCTCTAACTGCTCTTAATTCTGACGTTGAATGTAATAAAATGTCTGGTTCACATTCTTTGAGTATGCTTGTTCGTGCAATTCTATCAGATAAGAAGCCAGAGGAAGTTCCAACGTTGGTTGAATCTGTTTTGAACAAAGTTGTAGAGGAGTTTGAGCATCGAATTGCTAGCCAAGGTGAACAGACAAAAATAACTTCGGGTGATCCTGTTTCTCAAAGCAACGGGTCTGTATCAAAGATTTCTATTGCAGATAGAAAGGTGGAGCATAAGATTTATATGGTAACAAAGAAAGAGGATTACATTCATAAAAATCGAGTTGCTGATGAGGAATCACAAAGCCAACTTATGAAGAAGCAAATGCTCTTTGACCAGCAGCAAAGAGAAATTCAAGAACTAAAGCATACTCTTCACAGCACAAAAGCTGGTATGCAGTTCATGCAAGTGAAATTTCATGAGGAGTTTTCCAATCTTGGTGTGCACATTCATGGCTTAGCTCATGCTGCTTCCGGATATCATAGAGTTCTTGAAGAAAATCGCAAATTATACAATCAAGTCCAGGATCTTAAGGGAAGTATTAGGGTGTACTGTCGAGTAAGACCCTTCTTTTCTGGACAGTCAAACCATTTGAGCACAGTGGAAAATATAGAAGATGGCACTATCACAGTTAGTATTCCTTCAAAAAATGGGAAGGGACACAGATCCTTTAATTTCAACAAAGTCTTTGGACCATCTGCAACACAAGCTGAGGTCTTCTTAGATATGCAGCCACTCATTAGATCTGTTCTTGATGGTTATAATGTTTGCATATTTGCATATGGCCAAACAGGATCAGGAAAAACTTACACTATGAGTGGACCAAAAGAGATCACAGAGAAAAGCCAAGGTGTAAATTACAGGGCTCTAAGCGACTTGTTTCTTATAGCTGACCAAAGAAAAGACATTTTCCACTATGACGTTTCTGTTCAAATGATTGAAATTTATAATGAGCAAGTCAGGGATCTATTGGTCACTGATGGAACAAACAAAAGATTAGAAATTCGTAGTAGTTCTCACAAAGGGCTCAGTGTGCCAGATGCAAGCCTAGTTCCTGTATCATCAACTTGTGATGTTATTGAACTAATGAACCTTGGCCAAAGGAACCGTGCAGTTGGAGCAACAGCCCTTAATGACCGCAGTAGTAGATCTCATAGTTGCTTGACTGTTCATGTTCAAGGAAGAGATTTGGCATCTGGAACCATTCTTCGTGGATGCATGCATTTGGTTGACTTGGCAGGAAGTGAGAGGGTAGATAAATCTGAGGCCACAGGTGATAGACTAAAAGAAGCACAGCATATTAACAAATCGCTTTCAGCTTTGGGAGATGTCATTGCTTCCCTTGCTCAGAAAAACTCTCATGTTCCTTATAGAAATAGTAAACTCACACAGTTACTCCAAGATTCACTTGGAGGACAGGCTAAGACATTGATGTTTGTTCACATAAGTCCAGAGAGTGATGCTATTGGAGAAACAATTAGTACCTTAAAGTTTGCTGAAAGAGTTGCTACAGTTGAACTTGGTGCTGCTCGAGTAAACAAAGATGGTGCAGATGTTAAAGAGCTCAAAGAACAGATTGCTAGCCTTAAGGCAGCTCTAACAAGAAAGGAAGGAGAATCAGAACATTCTTTATCCAGCAGCTCCGGAAAATACAGGACTAGGGCTAGTGAGCTATCACCTTATCATATAAACCAGCGTGATGCAGACACTGGTGATCAGCTTGGATGCAGGCGACCAATGGTTGATGTTGGCAACATAGCGCTTCAGAGTAATACCACATTGAGGCACAAAACTGAGAGCTTTGATTTTGATGAGATATCAACAAATTCACCACCATGGCCCCCAGTGAATAGTCTTGGACAAAACTATGGAGAGGATGACAAAGAAACTGGTTCTGGAGAATGGGTTGATAAGGTCATGGTAAACAGACAAGACGTAAACAAAACCGAGAATCTCTTGGGCTGTTGGCAAGCAAGCAATGGGAACTTATCTGAGACATTTTATCAGAAATACCTCCAAGATTCTTCCAAAATGTACTCAGAACAATCCTATAATGTGTTCATGGGAAGCAACCACTTTAACATTGCTGGATCAGATGACATGGATGAGCTTGATGCTGCAACCAGTGATTCCTCGGAACCTGACTTACTTTGGCAGTTTAATCATTCCAAACTCACCAGCGTCACCAATGGAATTGGATCAAAGGCTATCAAATCCATCACAAAGGCAGCAAAAAGTCCAGAGTTGAGCAAGAATGGTGTTCATTCTTCTCTTGGTCCTTCACCTTCATTGAAACAATCAAATGGTGTCTCAAATCGAACAGGAAGGCATCCAGCTCCCGTTGACGTGAAACGTAAAACTGGGAGTAGAAAGTAA 3033 0.4131 MAAEAALFFSVASVVEDVLQQHGPPLKDLDLESRKAEEAASRRYEAAGWLRKMVGVVAAKDLPAEPSEEEFRLGLRSGIILCNVINKVQSGAVPKVVESPVDSALIPDGAPLTAYQYFENVRNFLVAVQEIGLPTFEASDLEQGGKSSRIVNCVLALKSYSEWKMTGANGAWKFGGNLKPTIAAKSFVRKNSEPFTNSLSRTSSANEKSLTALNSDVECNKMSGSHSLSMLVRAILSDKKPEEVPTLVESVLNKVVEEFEHRIASQGEQTKITSGDPVSQSNGSVSKISIADRKVEHKIYMVTKKEDYIHKNRVADEESQSQLMKKQMLFDQQQREIQELKHTLHSTKAGMQFMQVKFHEEFSNLGVHIHGLAHAASGYHRVLEENRKLYNQVQDLKGSIRVYCRVRPFFSGQSNHLSTVENIEDGTITVSIPSKNGKGHRSFNFNKVFGPSATQAEVFLDMQPLIRSVLDGYNVCIFAYGQTGSGKTYTMSGPKEITEKSQGVNYRALSDLFLIADQRKDIFHYDVSVQMIEIYNEQVRDLLVTDGTNKRLEIRSSSHKGLSVPDASLVPVSSTCDVIELMNLGQRNRAVGATALNDRSSRSHSCLTVHVQGRDLASGTILRGCMHLVDLAGSERVDKSEATGDRLKEAQHINKSLSALGDVIASLAQKNSHVPYRNSKLTQLLQDSLGGQAKTLMFVHISPESDAIGETISTLKFAERVATVELGAARVNKDGADVKELKEQIASLKAALTRKEGESEHSLSSSSGKYRTRASELSPYHINQRDADTGDQLGCRRPMVDVGNIALQSNTTLRHKTESFDFDEISTNSPPWPPVNSLGQNYGEDDKETGSGEWVDKVMVNRQDVNKTENLLGCWQASNGNLSETFYQKYLQDSSKMYSEQSYNVFMGSNHFNIAGSDDMDELDAATSDSSEPDLLWQFNHSKLTSVTNGIGSKAIKSITKAAKSPELSKNGVHSSLGPSPSLKQSNGVSNRTGRHPAPVDVKRKTGSRK* 1011
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0515 1010 Pfam Calponin homology (CH) domain 41 162 IPR001715 GO:0005515
Apr4g0515 1010 SMART kinesin_4 397 732 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr4g0515 1010 Coils Coil 323 343 - -
Apr4g0515 1010 Pfam Kinesin motor domain 405 723 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr4g0515 1010 PANTHER KINESIN-LIKE PROTEIN KLP-3 2 1007 - -
Apr4g0515 1010 Coils Coil 731 758 - -
Apr4g0515 1010 SMART ch_5 42 160 IPR001715 GO:0005515
Apr4g0515 1010 MobiDBLite consensus disorder prediction 962 1010 - -
Apr4g0515 1010 MobiDBLite consensus disorder prediction 751 772 - -
Apr4g0515 1010 SUPERFAMILY Calponin-homology domain, CH-domain 38 171 IPR036872 -
Apr4g0515 1010 ProSiteProfiles Kinesin motor domain profile. 399 724 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr4g0515 1010 PANTHER P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN 2 1007 - -
Apr4g0515 1010 CDD KISc_C_terminal 397 726 - -
Apr4g0515 1010 Gene3D - 27 184 IPR036872 -
Apr4g0515 1010 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 399 756 IPR027417 -
Apr4g0515 1010 ProSiteProfiles Calponin homology (CH) domain profile. 40 162 IPR001715 GO:0005515
Apr4g0515 1010 Gene3D Kinesin motor domain 394 765 IPR036961 -
Apr4g0515 1010 MobiDBLite consensus disorder prediction 969 993 - -
Apr4g0515 1010 PRINTS Kinesin heavy chain signature 472 493 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr4g0515 1010 PRINTS Kinesin heavy chain signature 594 611 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr4g0515 1010 PRINTS Kinesin heavy chain signature 625 643 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr4g0515 1010 PRINTS Kinesin heavy chain signature 674 695 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0515 Apr-Chr4 4281978 4287856 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g0515 387 724 Calmodulin-binding Proteins AT5G65930 43.023 1.93e-77 275
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0515 K10406 - gmx:100795476 1746.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0515 4 4281978 4287856 Apr8g0599 8 5450140 5454037 PCT