Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0493 ATGATCATTACAACACGCCTTATGTTTATGCTTGCATTGTTTCTTTCGCTACTTATAAACACTGGCCAAATGGTATTTGCAAAAGGGAGCAACGTTATAGAGGCTTGCAGTGTAACAAGGTACAAAAACCTTTGTGTCCACTCACTAGCACCTTTCTCTAAAGCTGCTGGAAGAAGCCCAAGCAAGTGGGCACGGGCAGGAGTGTCAGTGACAATAAGCCAGGTCAAGAATGTTCAAGCATATCTAGCAAAGTTGAAGAGGCAAGGGCATATGAAGGGGAGAAATAGAATTGCCCTTTCAGATTGTGTCGAATCTTTTGGCGTTGCCCTTGATGAGCTTCACATGTCACTTGGTGTGCTTAGGAAATTAAGCAGAAGCAAGTTTAGTACCCAAATTGGGGACCTCAATACATGGATCAGTGCTGCACTCACTGATGAAGATACTTGCCTTGACGGATTTCAAGGCCAAAATGAGAAACAAATTAAGTTGCTTCGGAAGCGGGTTCAGAATGTGTCTCACATAACCAGTAACGCTCTAGCTCTTGTCAACAAACTTGCCACTACAGGTCTGGGAAGCATCACCTATCCATAG 591 0.4382 MIITTRLMFMLALFLSLLINTGQMVFAKGSNVIEACSVTRYKNLCVHSLAPFSKAAGRSPSKWARAGVSVTISQVKNVQAYLAKLKRQGHMKGRNRIALSDCVESFGVALDELHMSLGVLRKLSRSKFSTQIGDLNTWISAALTDEDTCLDGFQGQNEKQIKLLRKRVQNVSHITSNALALVNKLATTGLGSITYP* 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0493 196 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR SUPERFAMILY PROTEIN 19 180 - -
Apr4g0493 196 TIGRFAM PME_inhib: pectinesterase inhibitor domain 7 185 IPR006501 GO:0004857
Apr4g0493 196 Gene3D Invertase/pectin methylesterase inhibitor family protein 28 187 IPR035513 -
Apr4g0493 196 PANTHER PECTINESTERASE INHIBITOR-LIKE 19 180 - -
Apr4g0493 196 CDD PMEI-like_3 35 187 - -
Apr4g0493 196 Pfam Plant invertase/pectin methylesterase inhibitor 34 181 IPR006501 GO:0004857
Apr4g0493 196 SMART PMEI_2 28 181 IPR006501 GO:0004857
Apr4g0493 196 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 34 185 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0493 Apr-Chr4 4124231 4125082 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g0493 35 193 Carbohydrate Esterase AT3G14310 34.545 2.07e-20 86.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0493 - - gmx:100791264 272.322