Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0471 ATGGTGAAGATGAAGAGGAAAAGCAATAGGAATGGAGAGGTAGAGAGGAGGAAGATGAAAGGCACGTTGTGTGGCAATAGCAGTGGGCACTTACAGCTTCAGCTTGGTCAATTCTCCCTCCTTCCCCTCCACCAACCATCTTCTACTTCCGGTTCTCGCTTCCAGAACCTTCTCGATTCTGAAGTTAACGACGTTGCTTCCTCTCGCGTGCCGGTTAACGACGATGCTGCCGCTGCCGCGGACGACAAAGACTTCATTCTCAGCCAGGACATCTTCTGCACTCCCGATTACATAACCCCTGATAATCAGAATGTTTTGAATGGCTTCGATTGTGACAAGGAAGATACTCCTTGCCCCAAATCACCCGAGAAATTGAACACTACAAAAAGCAAGAGGTGCCGACTGGGTAAGACTAGTTGAATCCCTCTCAGTCCTACCTTTTCTGGTGATCATCAACCAGTTGTGGAGCTTGGAAAGGATTTTGTTGCAGAAGAAGTAGCCGTTGAGAAAACAGTAGCACAAAATTATGTGTCACATTCAGCAATTGCATTGCGTTGCAGGGTTATGCCTCCTCCTTGCATTAGGAACCCCTATTTGAAAGATGTTTCAGAAAAAGAGACAGATCCTTTTGGAAACCAAAGATCAAAATGTGCAGGTCTCTTCCCTGCAATTACTGGTGGTGATGGGCTTTCACGCTATCGCACTGACTTTCATGAAATTGAGCAAATTGGAAGAGGGAACTTTAGTAGTGTTTTCAAAGCATTAAAACGAATAGATGGCTGCTTGTATGCTGTAAAACGCAGCATCAGACAATTACACCAGGAAACTGAAAGGAGAAAAGCTTTGATGGAAGTTCAAGCTTTGGCAGCCTTAGGTGCGCATGAGAACATTGTGGGGTATTATTCTTCATGGTTTGAAAACGAACAGCTCTACATTCAGTTGGAGCTATGTGATCACAGTTTATCCATAAGAAAATGCTCTGCATTATTTACAGAAGGACAGGTGCTTGAGGTTTTATTTCAGGTTGCCAATGCACTGCTATTTATACACGAGAAGGGAATTGCTCATCTAGATGTTAAACCTGATAATATTTATGTTAAAAATGGTGTTTATAAGCTTGGTGATTTTGGATGTGCAACTCTACTTGATAATAGCCTGTCAATTGAGGAGGGCGACGCACGTTATATGCCCCAGGAGATCCTTAATGAGAATTATGATCACCTTGACAAGGTGGATATCTTCTCTTTGGGAGCTTCTATTTTTGAACTGATTAGGAGGTTGCCTTTGCCAGAGTCAGGATCTCAGTTTTTCAATCTTAAAGAGGGGAAGTTGCCACTCTTGCCTGGTCATTCACTGCAGCTTCAAAACTTGCTCAAGGTCATGATAGACCCTGATCCGGTTAAGCGGCCTTCTGCTAGAGAGCTATTAGAGAATCCAATATTTTACAGGGCCCAAAGAACTGCGAAAAATTGA 1473 0.4338 MVKMKRKSNRNGEVERRKMKGTLCGNSSGHLQLQLGQFSLLPLHQPSSTSGSRFQNLLDSEVNDVASSRVPVNDDAAAAADDKDFILSQDIFCTPDYITPDNQNVLNGFDCDKEDTPCPKSPEKLNTTKSKRCRLGKTS*IPLSPTFSGDHQPVVELGKDFVAEEVAVEKTVAQNYVSHSAIALRCRVMPPPCIRNPYLKDVSEKETDPFGNQRSKCAGLFPAITGGDGLSRYRTDFHEIEQIGRGNFSSVFKALKRIDGCLYAVKRSIRQLHQETERRKALMEVQALAALGAHENIVGYYSSWFENEQLYIQLELCDHSLSIRKCSALFTEGQVLEVLFQVANALLFIHEKGIAHLDVKPDNIYVKNGVYKLGDFGCATLLDNSLSIEEGDARYMPQEILNENYDHLDKVDIFSLGASIFELIRRLPLPESGSQFFNLKEGKLPLLPGHSLQLQNLLKVMIDPDPVKRPSARELLENPIFYRAQRTAKN* 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0471 489 Gene3D Phosphorylase Kinase; domain 1 227 315 - -
Apr4g0471 489 ProSitePatterns Serine/Threonine protein kinases active-site signature. 353 365 IPR008271 GO:0004672|GO:0006468
Apr4g0471 489 SMART serkin_6 236 480 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr4g0471 489 MobiDBLite consensus disorder prediction 1 20 - -
Apr4g0471 489 ProSiteProfiles Protein kinase domain profile. 236 480 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr4g0471 489 PANTHER BNAA08G27310D PROTEIN 407 483 - -
Apr4g0471 489 PANTHER BNAA08G27310D PROTEIN 39 394 - -
Apr4g0471 489 Pfam Protein kinase domain 236 480 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr4g0471 489 ProSitePatterns Protein kinases ATP-binding region signature. 242 265 IPR017441 GO:0005524
Apr4g0471 489 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2-ALPHA KINASE EIF2-ALPHA KINASE -RELATED 407 483 - -
Apr4g0471 489 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2-ALPHA KINASE EIF2-ALPHA KINASE -RELATED 39 394 - -
Apr4g0471 489 MobiDBLite consensus disorder prediction 1 23 - -
Apr4g0471 489 Gene3D Transferase(Phosphotransferase) domain 1 316 484 - -
Apr4g0471 489 SUPERFAMILY Protein kinase-like (PK-like) 230 482 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0471 Apr-Chr4 3966911 3970771 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g0471 17 482 Core Cell Cycle Gene Families AT1G02970 62.185 0.0 585
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WEE Apr4g0471 Pkinase 3.8e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0471 K06632 - gmx:547742 790.801