Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0464 ATGAAAATGGTGGAAAGGAGAAAGCCTCTGATACTGTGTTCCACCAAACACATAATCAATTCCACTTCCCCAAACACCAATCTCTTCCAACACCAACCTTCTCCCAATCTCCGTTTGCCTGTTGGTATTCTCCGTTTCTCCAATCTACCAAATCCCTCTCTCGACCACTCTGCAATTCTCGCCCTCTCCACTCCCCTTCTCAAAACCCTTTCCATCACTTCTGGTTCCCCGGTTCTGGTCAAAAATGCTGAAATGAACATACACAGAATTGCACTGGCTATTGCTCTTGATCCTCCAGGCACACCCACTAATACGAACTCGCTCTCTTCTTCTTCTTCTTCTTCTTCTTCACGGATGATGCTTCTATTTCCTTCTTGTGATTTCCCTCTTAATGGTCCTTTATTAAACGATCACGTTGCTTATTTATCTCCGTTTTTAGCCTTTAACCTTAACTTGCACGTAGCATGCTTAAAGTCCATTTTACACCACGGCCAAGACGCTTTAGCATCATATTTCAAACCTCAAGGTAAAGGGGGTGATGAGGATACTGCTAGAAGCGTTGTAGATTCTGTCATCAACGTAGAATTGGAACCGTTTCTTCAACCTCCAAGGTTTGCCTCTCTTCTCAGGGTTTCTTTTGTGAAGATTCCGGAATGTGGCATCCTTGAATCTATTAGAACAAGTTCACCGATTGAGTCTCAAGAGCGTCAAGACATGATTGACTTGGCTTTGCAAAAGTACTTTGAAGTCGATAGGTATTTGTCAAAGGGAGATGTTTTCGGAATTAACATAAACTGGAACTGCAATTCCACCATTTGCATTCCTTGCAATCAAAGAACGCCAAATAAAGATGACAACCTTATTTGTTTCAAGGTCGTTGGCATGGAACCATCAGATGAACCAATTCTCCGGGTCAATAAAACATTAACTGCTCTCGTGCTAGTAGGGAGTTGCCCATCTGCACTTCCTCCAGATTTGATGATTGGTGGACCGCAAGGACCTGTGCCTTTGCACGGGGACACTGTAGATATCTTGGCTTCAATAATTACACCAACTGTCTGTCCGTCCGTGCTTTCTTCCAAGTTTAGAGTTTCAGTTTTATTGTATGGTTTGGCAGGTTGTGGGAAAAGGACTGTCATTAGATATGTTGCTCGTCGACTGGGCCTGCATGTGGTGGAATATAACTGTCATGATCTAATGGTGTCAGATAGAACATCTGTTGCTTTAGCACAAGCTTTCAAGACTGCTCGAAGATACTCGCCAGCAATACTTCTTCTTCGTCATTTTGATGTTTTTAGAGATTCACAATCACCCGAGGGTTCACTAAATGACCAAAGAAGTAATACAGCTGAAGTTGCATCAGTTATTAAGAAATTCACAGAGCCAGTTAGTGAACATGCTGACAATAACTCCCTTGGGAAATCAAATGGTGAATTTGTGGAGAAGAATGCTGAAAAGACAAGTGGGCATCAGGTCTTGTTGATTGCTGCTGCTGACAGTTCAGAAGGTCTGCCTCCAACTATTAGACGTTGTTTTAGCCATGAAATAAGTATGGGACCTTTGACTGAAGAGCAAAGGGCTGAAATGCTATTCCAGTCACTGCAAAGTGTTTCTGGACTGCTCTCTAATACTGATTCAGAGGCTTTAGTAAAAGAAATAGTTGGACAGACATCTGGTTTCATGCCCAAGGATATGTGTGCTTTAATTGCTGATGCTGGTGCCAACTTATTTCCCAGAAACAATGCTAAGGTAGACAAAGATGGGCCTGATGATGTAGATAGTTCTCTTTGTTCTGAGATGACGGAGGATAACATTCACCAGAAAGTTTCACCTCAGATTCCCGGGAAAGAAGACTTGATAAATGCTTTGGAACGATCAAAGAAAAGAAATGCATCAGCATTGGGTACTCCAAAGGTTCCAAATGTGAAATGGGAAGATGTTGGTGGACTTGAAGATGTGAAAAAATCAATCCTGGATACTGTTCAGTTACCTCTCCTACATAAAGATCTGTTTTCATCTGGATTACGTAAGCGATCTGGTGTTCTTTTGTATGGTCCCCCTGGAACTGGCAAAACATTATTAGCAAAAGCTGTTGCTACAGAGTGTTCCTTAAACTTTCTTAGTGTGAAAGGCCCTGAGCTGATCAACATGTACATTGGAGAGTCTGAGAAGAATGTTCGAGACATTTTTCAGAAGGCCAGATCAGCACGTCCATGTGTCATCTTCTTTGATGAGCTTGATTCTCTTGCACCAGCTCGGGGTGCTTCTGGAGATTCTGGGGGTGTTATGGACAGAGTGGTTTCTCAGATGCTTGCAGAGATTGACGGATTAAGTGATTCAACACAGGATCTGTTTATTATAGGTGCAAGTAACAGACCAGATTTGATAGACCCAGCACTTCTACGCCCTGGTAGATTTGATAAACTGCTATATGTTGGAGTTAACTCTGATGCATCTTACAGGGAGCGGGTCCTGAGAGCTCTTACCCGCAAGTTCAAATTGCATGAAGATGTTTCACTTTACTCTATAGCAGAAAAATGTCCGCCAAACTTCACTGGTGCAGACATGTATGCTTTGTGTGCAGATGCTTGGTTCCATGCTGCAAAACGCAAAGTTTTGAGTTCAAATCCAGAGTCTTCCAGCCAAGATAATGGGGCAGATTCTGTTGTTGTTGAATACAATGATTTTGTCCAGGTCTTAGCAGAGTTGCCACCTTCCCTCTCCATGGCCGAGCTTAAAAAGTATGAGCAACTGAGAGATCAGTTTGAAGGCACCTCTAAATGA 2784 0.4264 MKMVERRKPLILCSTKHIINSTSPNTNLFQHQPSPNLRLPVGILRFSNLPNPSLDHSAILALSTPLLKTLSITSGSPVLVKNAEMNIHRIALAIALDPPGTPTNTNSLSSSSSSSSSRMMLLFPSCDFPLNGPLLNDHVAYLSPFLAFNLNLHVACLKSILHHGQDALASYFKPQGKGGDEDTARSVVDSVINVELEPFLQPPRFASLLRVSFVKIPECGILESIRTSSPIESQERQDMIDLALQKYFEVDRYLSKGDVFGININWNCNSTICIPCNQRTPNKDDNLICFKVVGMEPSDEPILRVNKTLTALVLVGSCPSALPPDLMIGGPQGPVPLHGDTVDILASIITPTVCPSVLSSKFRVSVLLYGLAGCGKRTVIRYVARRLGLHVVEYNCHDLMVSDRTSVALAQAFKTARRYSPAILLLRHFDVFRDSQSPEGSLNDQRSNTAEVASVIKKFTEPVSEHADNNSLGKSNGEFVEKNAEKTSGHQVLLIAAADSSEGLPPTIRRCFSHEISMGPLTEEQRAEMLFQSLQSVSGLLSNTDSEALVKEIVGQTSGFMPKDMCALIADAGANLFPRNNAKVDKDGPDDVDSSLCSEMTEDNIHQKVSPQIPGKEDLINALERSKKRNASALGTPKVPNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSSGLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLSDSTQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDASYRERVLRALTRKFKLHEDVSLYSIAEKCPPNFTGADMYALCADAWFHAAKRKVLSSNPESSSQDNGADSVVVEYNDFVQVLAELPPSLSMAELKKYEQLRDQFEGTSK* 928
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0464 927 ProSitePatterns AAA-protein family signature. 784 802 IPR003960 GO:0005524|GO:0016887
Apr4g0464 927 SMART AAA_5 362 522 IPR003593 -
Apr4g0464 927 SMART AAA_5 677 817 IPR003593 -
Apr4g0464 927 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 640 921 IPR027417 -
Apr4g0464 927 Gene3D - 639 916 IPR027417 -
Apr4g0464 927 Pfam ATPase family associated with various cellular activities (AAA) 366 517 IPR003959 GO:0005524|GO:0016887
Apr4g0464 927 Pfam ATPase family associated with various cellular activities (AAA) 681 813 IPR003959 GO:0005524|GO:0016887
Apr4g0464 927 CDD AAA 356 426 - -
Apr4g0464 927 Gene3D - 815 901 - -
Apr4g0464 927 Gene3D - 342 540 IPR027417 -
Apr4g0464 927 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 339 587 IPR027417 -
Apr4g0464 927 PANTHER PEROXISOME ASSEMBLY FACTOR 2 32 923 - -
Apr4g0464 927 PANTHER AAA-FAMILY ATPASE 32 923 - -
Apr4g0464 927 CDD AAA 675 813 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0464 Apr-Chr4 3887849 3894663 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g0464 647 879 Calmodulin-binding Proteins AT3G56690 39.316 4.84e-40 158
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0464 K13339 - gmx:100820183 1571.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g0431 8 3693818 3694404 Apr4g0464 4 3887849 3894663 PCT