Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0437 ATGACAGGGCCAGTGATGGTGACAAAGGGTGGAGGATGCGGTGGCGGGAAGGGAAGGAGAGGAGCAAGAGAAGGCGAAGAAGACCAAAACCAGGCCTCGCCGGTGGCGGTTCTGTTGGCGGCGCTAAGAAAATCGATGGTGGCGTGCAGCGTCGACAGTCCGGATGACGTCATCTCCGCCGTGCATCCTATGGAGATTGGATGGCCCACCAACGTTAAACATGTCAGCCACGTCACCTTCGATCGCTTCAATGGCTTTCTGGGTCTTCCCCTTGAGTTAGAGGTTGATGTACCCGCTCCTGTTCCCAGTGCTAGTGTCAGCGTATTTGGCGTCTCAGCTGAATCAATGCAGTGTTCGTATGATTCCAAAGGAAACAGTGTCCCCACTATTCTATTGTTAATGCAGGAGAAATTATACTCTCAGGGAGGCCTAAAGGCTGAAGGAATATTTCGCATAAACCCTGAAAACAGTCAAGAGGAGCACTTGAGGGAGCAGTTGAATAGGGGCATTGTGCCAGATGACATTGATGTCCATTGCTTGGCTGGCCTAATTAAAGCATGGTTCCGAGAGCTTCCTTCGGGAGTGCTTGATGGACTATCCCCAGAGCAAGTTCTTCAGTGCAGCACAGAAGAAGAATCTGTTCAGCTTGTGAAGCAGCTAAAGCCAACTGAGTCAGCCCTGCTCAACTGGGCCATTGATCTAATGGCCGATGTTGTAGTAGATGAGGAGTATAACAAAATGGATGCAAGAAACATCGCAATGGTCTTTGCTCCAAATATGACTCAGATGTCTGATCCACTAACTGCCCTGATGCATGCGGTCCAAGTGATGAATTTACTGAAGACTCTGATACTAAAGACGCTTAGAGAGCGCGAAGAAACAGCTGCAGCAATAGCAACATGTTCACCAATGTCATTTCATTCATCAGATCGTGAATCTGAGGATGAATATGATAGTCAGCAAGAAATGGATACCAATGGTGAATTGAGAGAGACCAAGTTAGATTATGATGATAGCAGTGAAGAGGAAGGGGTGGGTGCTGCATCTGTAAGTGAGATAGTGGAATGCTTCTTGAAGCGATTGGACGAGAAAACAAAAAGATTTTCAGAAGAACCTGCAGGGTGTTTGCAAAACGAGAAGTTGGAGAGCCCAAGGGCCTCTAGCTATAACTTGGAATCTGCTTTATCATTTACTGATATCAAAACTGGGAATTCATGCTCAAGTTCCACTTGTGGAGATGAGTCAAGAACAACTTTGACTGCTGAGGGGTCATGTGTTGACACAAGTAGTCCATCTATAGGAAGTACAAGCACCAATGATGTGGAGATGATGGATAAATTTACAGATTCTGTTTCACTAGTTCCATTGTTTGCATCTAGTTAA 1383 0.4635 MTGPVMVTKGGGCGGGKGRRGAREGEEDQNQASPVAVLLAALRKSMVACSVDSPDDVISAVHPMEIGWPTNVKHVSHVTFDRFNGFLGLPLELEVDVPAPVPSASVSVFGVSAESMQCSYDSKGNSVPTILLLMQEKLYSQGGLKAEGIFRINPENSQEEHLREQLNRGIVPDDIDVHCLAGLIKAWFRELPSGVLDGLSPEQVLQCSTEEESVQLVKQLKPTESALLNWAIDLMADVVVDEEYNKMDARNIAMVFAPNMTQMSDPLTALMHAVQVMNLLKTLILKTLREREETAAAIATCSPMSFHSSDRESEDEYDSQQEMDTNGELRETKLDYDDSSEEEGVGAASVSEIVECFLKRLDEKTKRFSEEPAGCLQNEKLESPRASSYNLESALSFTDIKTGNSCSSSTCGDESRTTLTAEGSCVDTSSPSIGSTSTNDVEMMDKFTDSVSLVPLFASS* 461
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0437 460 ProSiteProfiles CRIB domain profile. 66 79 IPR000095 -
Apr4g0437 460 Pfam RhoGAP domain 128 262 IPR000198 GO:0007165
Apr4g0437 460 MobiDBLite consensus disorder prediction 1 30 - -
Apr4g0437 460 CDD CRIB 64 94 - -
Apr4g0437 460 PANTHER RHO GTPASE ACTIVATION PROTEIN-RELATED 1 460 - -
Apr4g0437 460 SMART PBD_5 66 100 IPR000095 -
Apr4g0437 460 SMART RhoGAP_3 125 288 IPR000198 GO:0007165
Apr4g0437 460 Gene3D Rho GTPase activation protein 98 292 IPR008936 GO:0007165
Apr4g0437 460 SUPERFAMILY GTPase activation domain, GAP 107 285 IPR008936 GO:0007165
Apr4g0437 460 Pfam P21-Rho-binding domain 65 96 IPR000095 -
Apr4g0437 460 Gene3D CRIB domain 62 95 IPR036936 -
Apr4g0437 460 PANTHER MKIAA1688 PROTEIN 1 460 IPR044785 GO:0005096
Apr4g0437 460 ProSiteProfiles Rho GTPase-activating proteins domain profile. 111 292 IPR000198 GO:0007165
Apr4g0437 460 MobiDBLite consensus disorder prediction 300 329 - -
Apr4g0437 460 MobiDBLite consensus disorder prediction 420 439 - -
Apr4g0437 460 CDD RhoGAP 128 278 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Apr4g0437 Apr-Chr4 3713068 3716070 Dispersed/Wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0437 - K20642 gmx:100812700 696.427
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0437 4 3713068 3716070 Apr4g0437 4 3713068 3716070 ECH
Apr4g0437 4 3713068 3716070 Apr3g2170 3 37569560 37579201 ECH
Apr4g0437 4 3713068 3716070 Apr8g0181 8 1450682 1452724 PCT