Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0423 ATGGCTGAAACCGTCGCCGAAGCTGATCCCACTCAGATCGATGTCAAGCTCTTCAATAGGTGGAGCTTCGACGATGTTCAGGTTAATGACATATCTCTGGCGGATTATATTGGAGTGGTGGCATCCAAACACGCCACATATGTCCCTCACACTGCTGGTAGGTACTCTGTGAAGCGTTTCAGAAAAGCTCAGTGCCCCATAGTTGAGAGGCTCACCAACTCTCTCATGATGCACGGTAGAAACAATGGCAAAAAGCTAATGGCTGTGAGGATTATTAAGCATGCTATGGAAATTATTCATTTGCTAACTGACCAGAACCCTATTCAAGTTATTGTGGATGCTGTTATCAACAGCGGTCCTCGTGAAGATGCAACTCGAATTGGTTCTGCTGGAGTTGTTAGAAGACAGGCCGTGGATATCTCACCCCTTCGCCGTGTTAATCAAGCCATCTATCTTCTAACAACAGGTGCACGCGAAGCTGCTTTCAGAAATATAAAGACAATTGCCGAATGCTTGGCTGATGAACTTATTAACGCAGCAAAAGGTTCATCCAACAGCTATGCTATCAAGAAAAAGGACGAGATAGAGAGAGTTGCCAAGGCCAACCGTTAA 612 0.4542 MAETVAEADPTQIDVKLFNRWSFDDVQVNDISLADYIGVVASKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR* 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0423 203 ProSitePatterns Ribosomal protein S7 signature. 69 95 IPR020606 GO:0003723|GO:0003735|GO:0006412
Apr4g0423 203 CDD uS7_Eukaryote 16 203 IPR005716 GO:0003735|GO:0006412|GO:0015935
Apr4g0423 203 TIGRFAM uS7_euk_arch: ribosomal protein uS7 15 203 IPR005716 GO:0003735|GO:0006412|GO:0015935
Apr4g0423 203 SUPERFAMILY Ribosomal protein S7 16 203 IPR036823 -
Apr4g0423 203 Gene3D Ribosomal protein S7 domain 1 203 IPR036823 -
Apr4g0423 203 PANTHER RIBOSOMAL PROTEIN S7 4 203 IPR000235 GO:0006412
Apr4g0423 203 PANTHER 40S RIBOSOMAL PROTEIN S5 4 203 - -
Apr4g0423 203 PIRSF RPS7p_RPS7a_RPS5e_RPS7o 2 203 IPR000235 GO:0006412
Apr4g0423 203 Pfam Ribosomal protein S7p/S5e 57 203 IPR023798 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0423 Apr-Chr4 3598404 3600835 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g0423 14 203 Cytoplasmic Ribosomal Protein Gene Family AT2G37270 92.632 1.31e-133 371
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0423 K02989 - gmx:100305898 374.785
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0423 4 3598404 3600835 Apr4g0423 4 3598404 3600835 ECH