Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Apr4g0393 | ATGAGCAACACAGGTGATACTAATTCCCCTGGTTTCCTTGGCTCCAGTAACATCAGTGGCTATAGCTATGGCATAGGAATTTCCATTGGAATTCTCTTGCTCATTATAACCATCACGCTAACATCTTACTTTTGCACCAGAATACAAGTGTCAACTGCTACATCTACTAGGAATAGGAGAAGTGCCCCTAATGCCCTTCAACCACATCACTCTATAGTTGATGTAAGTTTAGATGAAGCCACCATTTTGAGTTATCCAACCCTGTTGTATTCTGAAGCCAAGCTACAAAAATCTGATTCCACTGCAACATGTTGTTCCATATGTCTGGCTGATTACAAGGGTACTGATATGCTGCGTGTGTTACCTGGTTGTCGGCACCAGTTCCACATCAAGTGCATAGATCCATGGTTGAGATTGCATCCCACTTGTCCAGTTTGCAGAACATCTCCAATCCCAACACCACTTTCAACTCCTCTGGCTGAAGTTGTTCCATTAGCAAGCAGACAGGATTCCTAG | 516 | 0.4341 | MSNTGDTNSPGFLGSSNISGYSYGIGISIGILLLIITITLTSYFCTRIQVSTATSTRNRRSAPNALQPHHSIVDVSLDEATILSYPTLLYSEAKLQKSDSTATCCSICLADYKGTDMLRVLPGCRHQFHIKCIDPWLRLHPTCPVCRTSPIPTPLSTPLAEVVPLASRQDS* | 172 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Apr4g0393 | 171 | Pfam | Ring finger domain | 105 | 147 | IPR001841 | - | |
Apr4g0393 | 171 | SMART | ring_2 | 105 | 146 | IPR001841 | - | |
Apr4g0393 | 171 | CDD | RING-H2_PA-TM-RING | 104 | 147 | - | - | |
Apr4g0393 | 171 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 64 | 151 | IPR013083 | - | |
Apr4g0393 | 171 | ProSiteProfiles | Zinc finger RING-type profile. | 105 | 147 | IPR001841 | - | |
Apr4g0393 | 171 | SUPERFAMILY | RING/U-box | 85 | 152 | - | - | |
Apr4g0393 | 171 | PANTHER | RING-H2 FINGER PROTEIN ATL70-LIKE | 8 | 169 | - | - | |
Apr4g0393 | 171 | PANTHER | TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED | 8 | 169 | IPR045899 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Apr4g0393 | Apr-Chr4 | 3363163 | 3363678 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Apr4g0393 | 11 | 167 | C3H Transcription Factor Family | AT2G35910 | 64.780 | 2.04e-56 | 175 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Apr4g0393 | - | - | gmx:100811799 | 263.462 |