Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Apr4g0391 | ATGCCTCACTTGTTACATTCACTTCTCAATTCTGAAACCACAACCTTCTCTCTCTCTATCTCAATGACTACTACAGCTTCTGTTTCCTCTTCTATCTGCAATAGAATCTACAACTTCTCCTTTACCCACTCTTCCATTTCACTCACCAGCAACTTCCCTCAAAGACCCGTATCCCAGAAACCTCTCAACCTCAACGTTAAATATCAAAGTTTCAGCCTTTCCTTTCTCCCACTTCACCGTCTTCACCCACCTTTTGCTGCCTTTGATGGATTAGAAGTGGCTCAAGACAGCACAGAGTCCCAAGAAGAAGAGTCAGAACCACAAACCTTTGAAAACCCACAACAAGAGGAAGAGCAAAGAGTTTCAGACTCAAACGATGCTGGAAGGCTCTATGTTGGAAACTTGCCATTTTCAATGACTAATTCTCAATTGGCTGAGATCTTTGGAGAAGCTGGCACTGTGATGTCTGTTGAGATTGTGTATGACCGTGTCACGGATAGAAGCAGAGGATTTGCATTTGTTACAATGGGGAGGGTTGAGGATGCTAAAGAGGCAATTGGAATGTTTGATGGCTCTCAAGTTGGTGGTAGAACTGTTAAGGTAAACTTCCCAGAGGTGCCCAAAGGAGGAGAAAGGTTAGTAATGCGACCAAAAATACGGAACAACTACAGAGGTTTTGTGGACAGCCCTCACAAGATCTATGCTGGAAACCTTGGCTGGGGACTCACCTCACAGGGTCTTACAGAAGCTTTTGCAGAGCAGCCAGGTTTATTGAGTGCTAAGGTCATCTATGAGAGGGACAGTGGAAGATCTCGAGGCTTCGGCTTTGTTTCTTTTGAAACTGCTGAGGATGCAGCGGCTGCTTTGGAAGTTATGAATGGTGTGGATGTACAAGGTCGGCCCTTACGGTTGAATTTGGCTGAAGCGAGGGCGCCTTCATCTCCTCCAGTAATTGAGGAAAATGCAGGAAGCAGTGTTGATAGCTCGGAATTGCTGACTAGTGCCAGCACATGA | 1014 | 0.4556 | MPHLLHSLLNSETTTFSLSISMTTTASVSSSICNRIYNFSFTHSSISLTSNFPQRPVSQKPLNLNVKYQSFSLSFLPLHRLHPPFAAFDGLEVAQDSTESQEEESEPQTFENPQQEEEQRVSDSNDAGRLYVGNLPFSMTNSQLAEIFGEAGTVMSVEIVYDRVTDRSRGFAFVTMGRVEDAKEAIGMFDGSQVGGRTVKVNFPEVPKGGERLVMRPKIRNNYRGFVDSPHKIYAGNLGWGLTSQGLTEAFAEQPGLLSAKVIYERDSGRSRGFGFVSFETAEDAAAALEVMNGVDVQGRPLRLNLAEARAPSSPPVIEENAGSSVDSSELLTSAST* | 338 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Apr4g0391 | 337 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 231 | 309 | IPR000504 | GO:0003723 | |
Apr4g0391 | 337 | MobiDBLite | consensus disorder prediction | 318 | 337 | - | - | |
Apr4g0391 | 337 | PANTHER | OS02G0815200 PROTEIN | 21 | 319 | - | - | |
Apr4g0391 | 337 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 130 | 200 | IPR000504 | GO:0003723 | |
Apr4g0391 | 337 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 233 | 303 | IPR000504 | GO:0003723 | |
Apr4g0391 | 337 | Gene3D | - | 89 | 212 | IPR012677 | - | |
Apr4g0391 | 337 | CDD | RRM_HP0827_like | 129 | 205 | - | - | |
Apr4g0391 | 337 | Gene3D | - | 216 | 316 | IPR012677 | - | |
Apr4g0391 | 337 | SUPERFAMILY | RNA-binding domain, RBD | 124 | 205 | IPR035979 | GO:0003676 | |
Apr4g0391 | 337 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 128 | 206 | IPR000504 | GO:0003723 | |
Apr4g0391 | 337 | PANTHER | RNA-BINDING PROTEIN CP33, CHLOROPLASTIC | 21 | 319 | - | - | |
Apr4g0391 | 337 | MobiDBLite | consensus disorder prediction | 311 | 337 | - | - | |
Apr4g0391 | 337 | MobiDBLite | consensus disorder prediction | 96 | 111 | - | - | |
Apr4g0391 | 337 | MobiDBLite | consensus disorder prediction | 94 | 125 | - | - | |
Apr4g0391 | 337 | SUPERFAMILY | RNA-binding domain, RBD | 228 | 313 | IPR035979 | GO:0003676 | |
Apr4g0391 | 337 | SMART | rrm1_1 | 129 | 202 | IPR000504 | GO:0003723 | |
Apr4g0391 | 337 | SMART | rrm1_1 | 232 | 305 | IPR000504 | GO:0003723 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Apr4g0391 | Apr-Chr4 | 3343622 | 3346069 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Apr4g0391 | 115 | 310 | Eukaryotic Initiation Factors Gene Family | AT3G16380 | 32.000 | 3.66e-23 | 98.2 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Apr4g0391 | - | - | aprc:113861916 | 646.351 |