Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0379 ATGGACGACCCTTCTCCGACGCTCCTTTGCACTCTCCTCGTTCTCATATACCTAGCAGCACCTCCACTCTCCCTCGCCGCCACCGACCCAAACGACGTCAAAATACTCCAGCAGTTCAGAAAGGGCCTGGACAACCCAGAACTGCTTCCATGGCCCGATACCGGTGGAGACCCATGTGGTAGCCCGGGTTGGAAATACATTTACTGCGACGGCAACGGCAGAGTCCAGCAGATTCAAGCCAAGGACCTCAACCTTAGTGGCCCTCTTCCGCCCAACCTGAACCAACTCACCATGCTCTCCAACTTGGGCCTCCAGAACAACAGGCTCTCCGGCCCATTACCCTCCCTCTCCGGCCTCTCCAAACTCCAATACGCATTTCTCGACAACAACAACTTCAATTCCATTCCCTCCGATTTCTTCGACGGACTTCAGAGTCTGGAAGTTCTCGCTTTGGATCACAACAACCTTAACGCCAGCGCTGGTGGCTGGAACTTCCCTTCTTCGTTGCAGGGCTCCACTCAGTTGACCAATCTCTCTTGTATGTCCTGCAATTTGGTTGGTCCGTTACCCGATTTTCTCGCCAAGATGAACTCGTTGTCGTTTTTGAAGCTTTCCAACAACAATTTGAGTGGTCAGATTCCGGCCAGTCTAAATGGTTCGGCGTTGCAGGTTCTGTGGTTGAATAACCAACAGGGTGAGGGTCTTACTGGGAAGATTGATGTCGTGGCGACCATGGTTTCGCTCACTAGTTTGTGGCTTCATGGGAATGCCTTCACCGGATCGATTCCCGGTAACATTGGGGATTTGAGTTCTCTGAAGGATCTCGACCTTAATAGGAACCGTCTCGTTGGGTTAATCCCTGATGCGTTGGGGAACATGGAATTGGATAATCTGGATTTGAACAATAACATGTTGATGGGTCCAATCCCTAATTTCAAAGCTTCCAAAGTTTCTTACGATTACAATGATTTTTGTCAGAACAAATCGGGGGTTCCTTGCGCTTTTGAAGTGATGGCGTTGTTGGGGTTTCTTGGTGGGTTGAGTTATCCTTCGAATCTTGTTGATTCGTGGAAAGGGAATGATCCTTGTGGGGGAAATTGGTTAGGGATAAAGTGCAATGCCAATGGGAAGGTGGCTATGATTAATTTGCCAAGCTTTAATCTTAGTGGAACTTTGAGTCCTTCTGTTGCAAACTTGGCTTCTCTTGTTGAAATCAGGTTGGGGGGTAACAATCTGGGTGGTGTGGTACCTAGTAATTGGACTACTTTAGCGTCTCTGAAATTGTTGGATCTGAGCGGCAATAACATATCTCCTCCTTTGCCAGAGTTTAAGAATGGCTTGAAACCTGTTGTTGCGGGGAATCCTCTGTTCAATGGTGGCTCTGAAGTTCCTTCCTCAGGGGGCAACAACCCTTCAACTGGATCTGGGAATGGTGGACCTGGAACAGCTCACTCTAATTCAACTTCAAGTGATTCTGGTGAAACCAAAAAATCGAAAAGGAAAGGGTTGGTTTCGATTGTAGCCCCTATTGTGGGTGTGGCGGCTGCGGCTTTTCTGCTCATTCCACTCTATGCTTATTGTGTCAGGAGCAGAAAGGGTGGTTTCCAGGCTCCAACCTCACTGGTAGTTCACCCTAGAGATCCGTCTGATGCGGACAATACTGTAAAGATTGTTGTTGCTAATAATACCAATGGAAGCATTTCCACCATAACTGGGAGTGGGTCTGGGAGTAGAAACAGCAGTGGAATTGGGGATTCTCATGTCATTGAGGCTGGAAATCTTAAGATATCGGTTCAAGTTCTGAGAAACGTGACCAAGAATTTCGCTCCTGAGAATGAGCTTGGCCGCGGTGGATTTGGTGTTGTTTACAAGGGAGAGTTGGATGACGGGACTAAGATTGCAGTGAAAAGAATGGAAGCGGGAGTGATTAGTAGCAAAGCTTTGGATGAATTCCAGGCTGAAATTGCAGTTCTATCAAAAGTCCGACATCGGCATCTGGTGTCTCTTTTGGGTTATTCTATAGAAGGCAGTGAAAGAATTCTAGTGTATGAGTATATGCCACAAGGGGCTCTTAGTAAGCATCTTTTCCATTGGAAGAGCCTTGAACTGGAGCCCCTCTCTTGGAAGAGGAGGCTAAATATTGCCTTGGATGTAGCTAGGGGAATGGAGTATCTTCATACTCTGGCCCACCAAAGCTTCATTCACAGAGATCTTAAGTCGTCAAATATCCTGCTTGCTGATGATTTCAGAGCAAAAGTCTCTGACTTTGGACTGGTAAAACTTGCTCCTGAAGGTGAAAAATCTGTAGTGACTCGGCTTGCTGGGACTTTTGGATATCTGGCGCCAGAATATGCAGTGACGGGAAAAATCACTACCAAAGCAGATGTTTTCAGTTTTGGGGTTGTGCTAATGGAACTGTTGACTGGATTGATGGCACTTGATGAGGATAGACCTGAGGAAAGCCAATATTTGGCAGCATGGTTCTGGCATATAAAATCAGATAAGAAGAAACTAATGGCTGCTATTGATCCAGTACTTGATGTAAAGGAAGAAACATTTGAGAGCATATCCATCATTGCCGAGCTAGCTGGACACTGCACTGCCAGAGAACCAAACCAACGACCAGATATGGGTCACGCCGTGAATGTGCTGGCACCACTCGTTGAAAAATGGAAACCCTTTGATGATGACCCTGAGGAGTATTCTGGCATTGATTATAGCCTTCCCCTTAACCAGATGGTGAAGGGTTGGCAAGAGGCAGAAGGAAAGGACATCAGTTATATGGACTTAGATGACAGTAAGAGTAGTATCCCTGCAAGGCCTACTGGATTTGCGGATTCTTTTACTTCAGCGGATGGCCGGTGA 2865 0.4698 MDDPSPTLLCTLLVLIYLAAPPLSLAATDPNDVKILQQFRKGLDNPELLPWPDTGGDPCGSPGWKYIYCDGNGRVQQIQAKDLNLSGPLPPNLNQLTMLSNLGLQNNRLSGPLPSLSGLSKLQYAFLDNNNFNSIPSDFFDGLQSLEVLALDHNNLNASAGGWNFPSSLQGSTQLTNLSCMSCNLVGPLPDFLAKMNSLSFLKLSNNNLSGQIPASLNGSALQVLWLNNQQGEGLTGKIDVVATMVSLTSLWLHGNAFTGSIPGNIGDLSSLKDLDLNRNRLVGLIPDALGNMELDNLDLNNNMLMGPIPNFKASKVSYDYNDFCQNKSGVPCAFEVMALLGFLGGLSYPSNLVDSWKGNDPCGGNWLGIKCNANGKVAMINLPSFNLSGTLSPSVANLASLVEIRLGGNNLGGVVPSNWTTLASLKLLDLSGNNISPPLPEFKNGLKPVVAGNPLFNGGSEVPSSGGNNPSTGSGNGGPGTAHSNSTSSDSGETKKSKRKGLVSIVAPIVGVAAAAFLLIPLYAYCVRSRKGGFQAPTSLVVHPRDPSDADNTVKIVVANNTNGSISTITGSGSGSRNSSGIGDSHVIEAGNLKISVQVLRNVTKNFAPENELGRGGFGVVYKGELDDGTKIAVKRMEAGVISSKALDEFQAEIAVLSKVRHRHLVSLLGYSIEGSERILVYEYMPQGALSKHLFHWKSLELEPLSWKRRLNIALDVARGMEYLHTLAHQSFIHRDLKSSNILLADDFRAKVSDFGLVKLAPEGEKSVVTRLAGTFGYLAPEYAVTGKITTKADVFSFGVVLMELLTGLMALDEDRPEESQYLAAWFWHIKSDKKKLMAAIDPVLDVKEETFESISIIAELAGHCTAREPNQRPDMGHAVNVLAPLVEKWKPFDDDPEEYSGIDYSLPLNQMVKGWQEAEGKDISYMDLDDSKSSIPARPTGFADSFTSADGR* 955
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0379 954 PANTHER RECEPTOR PROTEIN KINASE TMK1-LIKE 11 954 - -
Apr4g0379 954 Pfam Leucine rich repeat 247 305 IPR001611 GO:0005515
Apr4g0379 954 PANTHER OSJNBA0070M12.3 PROTEIN 11 954 - -
Apr4g0379 954 SUPERFAMILY Protein kinase-like (PK-like) 585 884 IPR011009 -
Apr4g0379 954 MobiDBLite consensus disorder prediction 459 492 - -
Apr4g0379 954 ProSitePatterns Serine/Threonine protein kinases active-site signature. 733 745 IPR008271 GO:0004672|GO:0006468
Apr4g0379 954 ProSiteProfiles Protein kinase domain profile. 608 888 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr4g0379 954 SUPERFAMILY L domain-like 27 316 - -
Apr4g0379 954 CDD STKc_IRAK 614 887 - -
Apr4g0379 954 Gene3D Ribonuclease Inhibitor 335 457 IPR032675 -
Apr4g0379 954 Pfam Leucine rich repeat N-terminal domain 337 373 IPR013210 -
Apr4g0379 954 Pfam Leucine rich repeat N-terminal domain 30 70 IPR013210 -
Apr4g0379 954 SMART serkin_6 608 888 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr4g0379 954 SMART LRR_typ_2 143 166 IPR003591 -
Apr4g0379 954 SMART LRR_typ_2 269 292 IPR003591 -
Apr4g0379 954 SMART LRR_typ_2 423 445 IPR003591 -
Apr4g0379 954 SMART LRR_typ_2 245 268 IPR003591 -
Apr4g0379 954 SMART LRR_typ_2 196 220 IPR003591 -
Apr4g0379 954 SMART LRR_typ_2 119 142 IPR003591 -
Apr4g0379 954 Gene3D Ribonuclease Inhibitor 29 331 IPR032675 -
Apr4g0379 954 MobiDBLite consensus disorder prediction 458 499 - -
Apr4g0379 954 MobiDBLite consensus disorder prediction 929 954 - -
Apr4g0379 954 SUPERFAMILY L domain-like 336 447 - -
Apr4g0379 954 Pfam Protein tyrosine and serine/threonine kinase 611 882 IPR001245 GO:0004672|GO:0006468
Apr4g0379 954 ProSitePatterns Protein kinases ATP-binding region signature. 614 636 IPR017441 GO:0005524
Apr4g0379 954 Gene3D Transferase(Phosphotransferase) domain 1 686 900 - -
Apr4g0379 954 Gene3D Phosphorylase Kinase; domain 1 573 685 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0379 Apr-Chr4 3215300 3219285 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g0379 84 889 Receptor kinase-like Gene Family AT5G07280 32.930 1.98e-82 288
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Apr4g0379 PK_Tyr_Ser-Thr 2.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0379 - - gmx:100305366 1509.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0379 4 3215300 3219285 Apr4g0379 4 3215300 3219285 ECH
Apr4g0379 4 3215300 3219285 Apr8g0675 8 6300827 6304768 PCT